Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1285 ATGGAGCAGTATGAAATACTTGAGCAAATTGGAAAAGGTGCTTTTGGCTCTGCACTTCTTGTGAGGCATAAACATGAGAAGAAAAAATATGTGCTGAAGAAAATTCGCCTTGCTCGCCAAACTGAGCGGTCTCGTAGATCTGCACATCAGGAGATGGAGCTCATCTCTAAATTAAGAAATCCATTTATTGTGGAGTATAAAGATTCCTGGGTAGAAAAGGGTTGCTATGTGTGCATTATTATATGTTATTGTGAGGGCGGAGATATGGCAGAAGCTATAAAGAAGGCTAATGGTGTTCTTTTTTCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCTCTTGACTACTTACATCTGAACCATATTCTTCATCGTGATGTCAAGTGTTCAAATATATTTTTGACTAAAGATCAAGACTTACGCCTTGGTGATTTTGGACTTGCCAAATTGTTGACTTCAGATGATCTTGCTTCCTCTGTTGTGGGAACTCCTAGTTACATGTGCCCAGAGCTGCTTGCTGATATTCCTTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGACAGCTCATAAGCCTGCATTTAAAGCATTTGATATACAAGCACTAATCAATAAGATTAACAAGTCCATAGTAGCTCCGCTGCCAACGAAGTATTCTGGTGCATTTCGAGGTCTTGTTAAAAGCTTGCTGCGGAAAAATCCTGAGCTTAGACCTAGTGCTGCGGAGCTGCTTGGGCACCCGCATCTTCAACCTTATGTTCTCAAGATCCATCTCAAAATAAATAGCCCCAGGCGAAGTACAATACCTGTTCCTTGGCCAGAATCCCACTACATGAAGAAAACTAGATTTTTGGAGCCAGGAGATGATCCTATTTCCATCTACAGGGATAAGCGGCATTGTTTCAGCAATGATCGGACTCTTAATCCTAGCATATCTGGAGCTGAGCAAGATTCTGTATGCTCTACCCTGGAAATAGATTGTACCCCAGATCATTTGAGTCAACGGTTGGCAGAACTGTGTATTGGAGATAGCCTCGAGGTGAAGTCAGTTCGTAAGCCTGTTGTATCAAGGACTTATAGCACTTCAAAGACTCCGAGAGTTACCTCCATGAAAGCTCCTCCCACCCCTAAGAAATCAATGGAGCCCTCAAAGAAGCGTGAGTCGCTTGCTGCTTCGCGTAATGCCAGACAATCATTCTATACAACTCACAGAGCATCATTTCCGTTGCGGACGAGAGGTTCTATTCAAAAGTCTCCTCCAAAGCCTGGTGTTGGTTTACTTGACCACATAAAATCGCCAGATATTTCGGTAAACTCACCCAGAATTGATAAGATAGCTGAATTCCCATTAGCGTCATACGAGGAAACACTGTTTCCTATCAATAGAACTTCATCAACTTCAGCACGGGGCTCCTCTGGCTTCCCACCTTGTGATGATCGTTCAATCATGAAAGATAAATGCACAGTTCAGGTATGTGATACTGCCACCATCAGGCCTTGTTCGGCAGATGCTTGGCAGAGCATCAAGCTCGACATGATTAAGGGAAATGCTGAAGATAAAAGTGACGACTCTGATCAAAATGCAACTGCTGGAGCATCAAGCCGTGCCTCTTCAGGCTCGCGTCGCGGGCAGTTTGACACTTCATCATTCCAACAAAGGGCTGAAGCCTTAGAAGGGTTGCTTGAATTTAGTGCAAGATTGCTACAACACCAAAGATATGAAGAACTTGGGGTCTTATTGAAACCATTTGGGCCAGGGAAGGTCTCTCCAAGGGAAACTGCCATCTGGTTGAGTAAGAGCTTAAAAGAGAACACTCTCAACCGGGAAGAATCCTTGTAA 1866 0.4319 MEQYEILEQIGKGAFGSALLVRHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIICYCEGGDMAEAIKKANGVLFSEEKLCKWLVQLLMALDYLHLNHILHRDVKCSNIFLTKDQDLRLGDFGLAKLLTSDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMTAHKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSLLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPRRSTIPVPWPESHYMKKTRFLEPGDDPISIYRDKRHCFSNDRTLNPSISGAEQDSVCSTLEIDCTPDHLSQRLAELCIGDSLEVKSVRKPVVSRTYSTSKTPRVTSMKAPPTPKKSMEPSKKRESLAASRNARQSFYTTHRASFPLRTRGSIQKSPPKPGVGLLDHIKSPDISVNSPRIDKIAEFPLASYEETLFPINRTSSTSARGSSGFPPCDDRSIMKDKCTVQVCDTATIRPCSADAWQSIKLDMIKGNAEDKSDDSDQNATAGASSRASSGSRRGQFDTSSFQQRAEALEGLLEFSARLLQHQRYEELGVLLKPFGPGKVSPRETAIWLSKSLKENTLNREESL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1285 621 MobiDBLite consensus disorder prediction 526 558 - -
Bisa07g1285 621 FunFam Serine/threonine-protein kinase Nek2 1 83 - -
Bisa07g1285 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Bisa07g1285 621 SUPERFAMILY Protein kinase-like (PK-like) 1 300 IPR011009 -
Bisa07g1285 621 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Bisa07g1285 621 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Bisa07g1285 621 MobiDBLite consensus disorder prediction 535 558 - -
Bisa07g1285 621 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1285 621 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bisa07g1285 621 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 571 - -
Bisa07g1285 621 MobiDBLite consensus disorder prediction 365 404 - -
Bisa07g1285 621 FunFam Serine/threonine-protein kinase Nek3 86 332 - -
Bisa07g1285 621 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1285 621 CDD STKc_Nek 3 258 - -
Bisa07g1285 621 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1285 Bisa-ChrBisa07 33575480 33581425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1285 10 259 MAP Kinase Kinase Kinase AT1G53570 31.765 6.03e-37 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bisa07g1285 Pkinase 1.7e-63 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1285 07 33575480 33581425 Bisa07g1285 07 33575480 33581425 CCT
Bisa07g1285 07 33575480 33581425 Bisa07g1285 07 33575480 33581425 ECH