Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1272 ATGGCTACGAAAGACATGAACGAGCTCGATGCGACGGAGCTCCGACTAGGTCTCCCCGGCACCACAGACGAAGACTCTGAGAACCAAAATCAAACCAGACACAACAAAAGATCATTGCTCCAAGCAGAAGACCACGATCTTACTGCAGATCCAAAACATTCTGTTCAACAACCTTCCAAGGCACAAGTGGTGGGATGGCCTCCGGTTCGATCGTACCGCAAGAACTGTATGCAATCGAAGAAGAAGGAGACTGAGACTGGGCTGTACCTTAAAGTCAGCATGGACGGAGCTCCTTACCTCAGGAAGATTCGTCTGAATCAGTACAAGGATTACTCGCAACTCTTACAGGCTCTGCAACTTATGTTCAACTTCAAACTCGGTGTGTATTCCGAAACGCAGGGCTACGATGGATCTGAATATGTCCCGACTTACGAAGATAAAGATGGAGATTGGATGCTGGTCGGAGACGTTCCATGGGATATGTTCACTGGCTCCTGCAAAAGGCTGCGAATCATGAAGGCGTCAGAAGCCAAGGGGTTGGGTCGCGCCGTATGA 555 0.4955 MATKDMNELDATELRLGLPGTTDEDSENQNQTRHNKRSLLQAEDHDLTADPKHSVQQPSKAQVVGWPPVRSYRKNCMQSKKKETETGLYLKVSMDGAPYLRKIRLNQYKDYSQLLQALQLMFNFKLGVYSETQGYDGSEYVPTYEDKDGDWMLVGDVPWDMFTGSCKRLRIMKASEAKGLGRAV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1272 184 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 178 IPR003311 GO:0005634|GO:0006355
Bisa07g1272 184 MobiDBLite consensus disorder prediction 1 63 - -
Bisa07g1272 184 SUPERFAMILY CAD & PB1 domains 81 173 - -
Bisa07g1272 184 Pfam AUX/IAA family 45 181 IPR033389 -
Bisa07g1272 184 Gene3D - 81 184 - -
Bisa07g1272 184 ProSiteProfiles PB1 domain profile. 87 174 IPR000270 GO:0005515
Bisa07g1272 184 MobiDBLite consensus disorder prediction 27 51 - -
Bisa07g1272 184 FunFam Auxin-responsive protein 82 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1272 Bisa-ChrBisa07 32276752 32277517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1272 81 180 B3 DNA Binding Superfamily AT4G23980 33.000 1.78e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa07g1272 AUX_IAA 1.9e-53 CL0072