Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1252 ATGGCTCCCAATCCAACTCCCTGTCCAAGATTCACCAAGGCCATCAGTGCTATGAGGGCCTTAGGAATTTCTCACGATGATGTGAAACCAGTGTTGCAAAAGCTGTTAAGAGTGTATGAGAATAACTGGGAACTTATTGAAGAAGATAACTATCGGACGCTTATAGATGCATACTTTGAGAAGGAAGATAAGGTAAAACAGGGTAAGAGAAAAGCCCCAATCAGTCATCATGGTGGAGAAAGACAAACCGAAAAATTGCATTTGGTAGATGAAGATGAGTTGTTAACCATGGACAACTCAGGACAAATAATATCTATAGAAGATAATGAAACACCTCTACATACTGTTGGACAAGAAATCATTGGGTCATGTCAACCTTTAACAAGCAATATGAGACCCAAAATTAGTTCTCAATCACTGAAAACAAGGCATAGTGAGGTAGAAAGGACATCAAAGTTACCTGGTATGGCAACTTCAGATGGAAAATCAAATCCCAGGAAAGCGTCATCTGCAGGGCATGGTGAGCCTAGCTCTGCTTATATCCAAAGAGAAAATTTTCTAAGTAACCATTTTAAGGAAGAGGTAGTGAAGCCAAAAACTGAGGGATATAAGTTACATCTTGGACCCAGTTCAACAAGATGTAGAGGCTCAACTGAGGTTTCAACCGGAAATCATTGTGTCAAGTTGCTGTCTTCTCAGAATCTGCCTATGAACAATAGAGATGATAATTTTGCACATATTAACAACCCCACAAGCTGTAAGGCTATTGATATTGCCTCTTCACCTTTGGGAGAAGTGAAAATTTCCCTAAACTGTGACTATGCCCTTGGACAATCAAACTTCAGTGTTCCTAACTTGGATGCTGTTATGGAGTTCATGGAGAAGTACCTCGAGTCTTGCAATATTGTTGGGCCCCAATTTTCTATGGTGAGGCTATTAAATGATTTATGTGAGAGTTTCCTTAAATTGGGCATGAATATGGATCAAAATGGTTCACATCCTGAGTATAACAACACAAACAAATTAACAATTGTGCCCCAACAATCTGTTTCTCAAGATAAGAAGAAGCCCTTTAATTTCCTCAGTGACATAGCAAAAGGTTCAGAAAAGGTGAAAATATCCTTGTTAGATGAATTTGGCAATGAGGAATTGCCAAAGTTTAATTACATTCCATGTAATCTAATATATCAACATGCTAATGTAAATATTTCACTGGCTCGTATTGCGGATGAGGGTTGCTGTCCAGATTGTGCAGGAAACTGTCTTTCTGCATCATTACCTTGTGCATGTGCTCAAGAAACTGGTGGAGAGTTTGCTTACACTCTGCAAGGTCTGTTGAAAGATGAATTTCTGACGGTTTGCATGTCTATGAAAAAGGAACCTCAAGATGATCACTTTGTGTTCTGTCGAGAGTGCCCACTGGAAAGGTCCAAGAATGAGTACATGCCTGAGCAATGCAAGGGGCATCTGATTAGGAAGTTCATTAAGGAATGTTGGAGTAAATGTGGGTGTGACATGCAGTGTGGAAATCGTGTAGTGCAACAAGGTTTAAGATGCAAATTGCAGGTGTTCTTTACACGTGAAGGAAAGGGCTGGGGTGTTAGAACACTAGAAGATTTGCCTAAGGGATCCTTTATATGTGAATACGTTGGAGAAATATTAACCAACACGGAGTTATATGAACGGACTGTGAACAATAATGGCAACGACAGACATACATATCCTGTAACCCTTGATGCAGACTGGGGCTCAGAAGGGGTGTTAAAGGATGAGGAGGCACTATGTTTAGATGCAACATATAATGGAAACGTTGCAAGGTTTATCAATCATAGATGCTCAGATGCAAATCTGATAGACATTCCCGTTGAAGTGGAGACTCCAGATCGCCATTATTACCATCTTGCATTCTTTACTAACAGGAACGTGAGAGCTCTTGAGGAGTTGACATGGGATTATGGTATTGACTTTGATGATCATGACCACCCTATTAAAGCGTTTAGATGTTGTTGTGGAAGCACATCCTGCCGTGATAAGAAACGAAAAGGGAAAAGAAAAATAGAGAAACTGCAACTGGAGCCAAACAATATTCTTGAGGGAAAACATCTTTTTGATACAAAAGTCAGGTGA 2127 0.3996 MAPNPTPCPRFTKAISAMRALGISHDDVKPVLQKLLRVYENNWELIEEDNYRTLIDAYFEKEDKVKQGKRKAPISHHGGERQTEKLHLVDEDELLTMDNSGQIISIEDNETPLHTVGQEIIGSCQPLTSNMRPKISSQSLKTRHSEVERTSKLPGMATSDGKSNPRKASSAGHGEPSSAYIQRENFLSNHFKEEVVKPKTEGYKLHLGPSSTRCRGSTEVSTGNHCVKLLSSQNLPMNNRDDNFAHINNPTSCKAIDIASSPLGEVKISLNCDYALGQSNFSVPNLDAVMEFMEKYLESCNIVGPQFSMVRLLNDLCESFLKLGMNMDQNGSHPEYNNTNKLTIVPQQSVSQDKKKPFNFLSDIAKGSEKVKISLLDEFGNEELPKFNYIPCNLIYQHANVNISLARIADEGCCPDCAGNCLSASLPCACAQETGGEFAYTLQGLLKDEFLTVCMSMKKEPQDDHFVFCRECPLERSKNEYMPEQCKGHLIRKFIKECWSKCGCDMQCGNRVVQQGLRCKLQVFFTREGKGWGVRTLEDLPKGSFICEYVGEILTNTELYERTVNNNGNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVARFINHRCSDANLIDIPVEVETPDRHYYHLAFFTNRNVRALEELTWDYGIDFDDHDHPIKAFRCCCGSTSCRDKKRKGKRKIEKLQLEPNNILEGKHLFDTKVR 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1252 708 Gene3D - 4 64 IPR043017 -
Bisa07g1252 708 Pfam SET domain 531 653 IPR001214 GO:0005515
Bisa07g1252 708 Pfam Ubiquitin-binding WIYLD domain 10 64 IPR018848 -
Bisa07g1252 708 CDD SET_SETDB-like 385 653 - -
Bisa07g1252 708 ProSiteProfiles Pre-SET domain profile. 417 516 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa07g1252 708 Gene3D SET domain 364 678 IPR046341 -
Bisa07g1252 708 ProSiteProfiles SET domain profile. 519 653 IPR001214 GO:0005515
Bisa07g1252 708 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 685 - -
Bisa07g1252 708 SMART preset_2 361 503 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa07g1252 708 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 708 IPR025776 -
Bisa07g1252 708 MobiDBLite consensus disorder prediction 127 177 - -
Bisa07g1252 708 FunFam SET-domain containing protein lysine methyltransferase family protein 364 678 - -
Bisa07g1252 708 SUPERFAMILY SET domain 371 676 IPR046341 -
Bisa07g1252 708 Pfam Pre-SET motif 364 511 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Bisa07g1252 708 SMART set_7 519 659 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1252 Bisa-ChrBisa07 31795925 31801024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1252 495 676 C2H2 Transcription Factor Family AT2G23740 40.642 3.45e-32 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa07g1252 Pre-SET 3.4e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1252 07 31795925 31801024 Bisa07g1252 07 31795925 31801024 CCT
Bisa07g1252 07 31795925 31801024 Bisa03g0663 03 8607450 8614334 CCT
Bisa07g1252 07 31795925 31801024 Bisa07g1252 07 31795925 31801024 ECH