Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1250 ATGACACTGATTAGGGCTTTTTGGAGGTTCGTCCATTCGCTCTCGCTTTTCATTTCACTGTTAGATCCAGCCTTTCACCAATACAATAAGCCAACATGGACTTCTTCACCTTTTTATCTTAGTTGTCTCCGTCTCGCCTCCACAACTTGCAATTCGCAGCCAAACAGCATCACACGACATCCATCCGAATCCGACGGCCCAAATTCAGCGCTCGCTTCTCCTCGCTGCGGGATGCTATGTTCTCAGAATCTCAGTCGTCCACATAGAATTTCCCACCCTGTCATAAAAGAGTCAAATGCTAAAAGCCTTCTAGGTCCTCTCATCCTTGCGACGGGACGGACGGAGATTGCATTTCAGTCAGACAAAGCTGAGTCTTTTAGGAGCAACCAAATTCATGTCTCCATATGTTCTTTGCATTCATCTGAAGACCGGTATATGAAACCCCTAGATTCTTTTCAGCTAACCACTGTCCAACATCTAACTGCAGATCCAGCCCTAATGCAAGCTGCTCCATCAAATTCCAACATCAGAGGTGTTGGACACATGTTTTCCTCCCCTGCTGAATGCCCTGATGACATTCCTTTTTCCTCAGTTTCACAACATGATAAGCAGTTTCAAGATTCTCCCTTGATTTCTCGGAAAATAAGTGACAATGGGTCTTTCCCACCAACACATTCTTCCCATTCGGAAATGCATTCTACATCGTTCGTTTCTCATCCCCTGGAAAGTGACGAGATTACCTGGGGACCAGATCCATTTCAGGATCTTCTTAATTTTCCTGAAAATGTTTCTGTCCACAATCATCAAGTGGAAAATAGTACTTGTCACATACCTGATGACAATGCTAAAAAAACCGATTTTGGAGAATGGGTTGAGCAGTTCATGTTGGCTGATGATTCTCTGCACCCAAATTGGAGTCAGCTTCTCGGTGATGGTAATGTAACAGATTCAAAATCAAAGGAGACTCAGGTTTCCCAGCAACAGCAGGTACCATCTGAAGAAGTTAATGCCCTTCCTACCTCAGTGTCAACTGCACCTCAAAGTCAAACTAAGCCAAGGATGCGTTGGACACCAGAACTTCATGAGGCCTTTGTGGAAGCAGTTAATCAGCTGGGTGGTAGCGAGAAGGCTACTCCGAAGGGTGTCTTGAAGCTGATGAAGGTTGAGGGCCTTACCATCTATCATGTGAAAAGTCACCTACAGAAATATAGGACTGCCAGATACAAAGTTGAGCCATCAGAAGGAACTTCTGAGAAGAAGTTGACATCAATTGAAGAAATGAAATCTCAAGACTTGAAAGCGAGTATGGGGATCACTGAAGCACTGCGGTTGCAGATGGAATTACAGAAACGACTTCATGAACAACTTGAGATTCAAAGAAAGTTGCAAATTCAAATTGAGAACCAAGGGAAGTGTCTTCAGATGATGTTTGAGAAACAGAGAGAGATGGAGGATGGCAAGCTCAAGGGCTCCTCCTCCTCCTCGGATGGGCCTTCTGCTCCACCGTCAAACAAGGAGGCACCTTTCTCTGTGGCTGACAATTTAGAAATCTCGAAAGAGGGCCACAACAATTCTGGAATAAGCCGTAGCGTTGCAAAAGCTATGCCAGACGAAAATTACCAGGACGCAAGCACAAAGCTAAAAGCTGATGACAATATGGTTGAACATGATGATGCATTACCACCCCCAAAACGGATAAAAAGTTGA 1707 0.4452 MTLIRAFWRFVHSLSLFISLLDPAFHQYNKPTWTSSPFYLSCLRLASTTCNSQPNSITRHPSESDGPNSALASPRCGMLCSQNLSRPHRISHPVIKESNAKSLLGPLILATGRTEIAFQSDKAESFRSNQIHVSICSLHSSEDRYMKPLDSFQLTTVQHLTADPALMQAAPSNSNIRGVGHMFSSPAECPDDIPFSSVSQHDKQFQDSPLISRKISDNGSFPPTHSSHSEMHSTSFVSHPLESDEITWGPDPFQDLLNFPENVSVHNHQVENSTCHIPDDNAKKTDFGEWVEQFMLADDSLHPNWSQLLGDGNVTDSKSKETQVSQQQQVPSEEVNALPTSVSTAPQSQTKPRMRWTPELHEAFVEAVNQLGGSEKATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYKVEPSEGTSEKKLTSIEEMKSQDLKASMGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKCLQMMFEKQREMEDGKLKGSSSSSDGPSAPPSNKEAPFSVADNLEISKEGHNNSGISRSVAKAMPDENYQDASTKLKADDNMVEHDDALPPPKRIKS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1250 568 Coils Coil 439 459 - -
Bisa07g1250 568 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 348 408 IPR017930 -
Bisa07g1250 568 SUPERFAMILY Homeodomain-like 349 405 IPR009057 -
Bisa07g1250 568 NCBIfam myb-like DNA-binding domain, SHAQKYF class 351 405 IPR006447 GO:0003677
Bisa07g1250 568 FunFam Myb family transcription factor 350 408 - -
Bisa07g1250 568 MobiDBLite consensus disorder prediction 212 231 - -
Bisa07g1250 568 MobiDBLite consensus disorder prediction 543 568 - -
Bisa07g1250 568 MobiDBLite consensus disorder prediction 482 568 - -
Bisa07g1250 568 MobiDBLite consensus disorder prediction 325 353 - -
Bisa07g1250 568 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 330 519 IPR044848 GO:0003700
Bisa07g1250 568 Pfam MYB-CC type transfactor, LHEQLE motif 436 482 IPR025756 -
Bisa07g1250 568 Gene3D - 350 409 - -
Bisa07g1250 568 Pfam Myb-like DNA-binding domain 353 404 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1250 Bisa-ChrBisa07 31771298 31776157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1250 160 509 G2-like Transcription Factor Family AT3G04450 45.283 7.26e-82 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa07g1250 Myb_DNA-binding 1.2e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1250 07 31771298 31776157 Bisa07g2019 07 48227180 48230927 CCT
Bisa07g1250 07 31771298 31776157 Bisa07g1250 07 31771298 31776157 ECH