Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1236 ATGTGCGACCAGCAACTCCGGCTCGACTACCAATTGAGCGAAGAGATCGGACGCGGTCGATTCGGCACCATCTTCCGCTGCTTCCACCCTTGCTCCGACGAACCCCTCGCCTGCAAGGTCATCGACAAACGACTCCTTGCCGATTCTCTCGATCGCGATTGCCTCGAGAATGAGCCGAAATTCATGGCCCTGCTTTCTCCTCACCCTAATATTCTTCGCATTTACGACGTCGTCGAGGACGAAGATTCGTTATCCTTGGTCCTCGATCTCTGCCAGCCCCTCACTCTCTTCGATCGCATCGTCGATCAGCCTCTGTCCGAGGTTCAGGCGGCTTCCGTCATGAAGCAGCTTCTGGAAGCGATTGCGCATTGTCACAGATTGGGGATAGCGCATAGGGACATTAAGCCGGATAATATTTTGTTCGATTCGCAGGATGTGCTCAAGGTCGCGGACTTCGGGTCGGCGGAGTGGTTTGGTGAGGGAGGGAGTATGAGCGGTGTGGTGGGGACGCCGCTGTACGTGGCGCCGGAGGTGTTATTGGGGAGGCAGTACAATGAGATGGTGGATGTATGGAGTAGCGGAGTGATTTTGTACATAATGTTGTCTGGGATTCCTCCGTTCTATGGGGAATCCGCGGAGGAGATCTTCGAGGCAGTGTTGAGGGCGAATCTGAGATTTCCGTCTAGGATTTTCAGGTCTGTGTCTTCAGCGGCTAAGGATCTCATGAGGAAGATGATCTGCAGAGATCCATCGAGAAGATTATCTGCAGAGCAAGCCCTGAGGCACCCATGGATCCTGAATGGAGGAGAAACAGCCAATCTGACTTAA 828 0.5362 MCDQQLRLDYQLSEEIGRGRFGTIFRCFHPCSDEPLACKVIDKRLLADSLDRDCLENEPKFMALLSPHPNILRIYDVVEDEDSLSLVLDLCQPLTLFDRIVDQPLSEVQAASVMKQLLEAIAHCHRLGIAHRDIKPDNILFDSQDVLKVADFGSAEWFGEGGSMSGVVGTPLYVAPEVLLGRQYNEMVDVWSSGVILYIMLSGIPPFYGESAEEIFEAVLRANLRFPSRIFRSVSSAAKDLMRKMICRDPSRRLSAEQALRHPWILNGGETANLT 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1236 275 FunFam Phosphoenolpyruvate carboxylase kinase 2 2 275 - -
Bisa07g1236 275 Gene3D Phosphorylase Kinase; domain 1 2 92 - -
Bisa07g1236 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 7 269 - -
Bisa07g1236 275 Gene3D Transferase(Phosphotransferase) domain 1 95 274 - -
Bisa07g1236 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bisa07g1236 275 SMART serkin_6 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1236 275 ProSiteProfiles Protein kinase domain profile. 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1236 275 CDD STKc_CAMK 9 264 - -
Bisa07g1236 275 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Bisa07g1236 275 Pfam Protein kinase domain 10 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1236 275 SUPERFAMILY Protein kinase-like (PK-like) 9 267 IPR011009 -
Bisa07g1236 275 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 92 - -
Bisa07g1236 275 PIRSF ILK 3 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1236 Bisa-ChrBisa07 31388465 31389519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1236 4 273 EF-hand Containing Proteins AT1G50700 41.971 3.71e-77 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa07g1236 Pkinase 2.3e-70 CL0016