Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1233 ATGGACCAATCAGTTCTTGATGACATTATCAATCGTCTGCTTGAAGTTCGCGGCCGTCCAGGCAAGCAGGTTCAGCTATCGGAGTCGGAGATCCGCCAGCTATGTCTAGCTTCTAAAGAGATTTTCTTGCAACAGCCTAATTTGTTGGAGCTTGAAGCACCCATTAAGATTTGTGGTGATGTGCACGGTCAATATTCTGATCTTTTAAGACTTTTTGAGTATGGTGGATTACCTCCTCATGCGAACTATTTGTTTTTGGGGGATTATGTTGATAGAGGGAAACAGAGTTTAGAAACAATATGCCTCCTCCTGGCTTATAAAATAAAATATCCTGAGAACTTTTTCCTTTTGAGAGGGAACCACGAATGTGCTTCTATAAACCGAATATATGGATTTTATGACGAGTGTAAGAGAAGGTTCAATGTAAGGTTATGGAAGACATTTACAGACTGCTTCAACTGCCTGCCTGTGGCAGCTCTTATTGATGAGAAGATTCTCTGTATGCACGGGGGACTTTCACCTGAGTTAAATAGTTTGGATCAAATAAGAAATATACAGCGGCCCACTGATGTCCCAGATTCAGGTTTGCTTTGTGATCTCCTTTGGTCTGACCCAAGCAAAGAAGTCCAAGGTTGGGGAATGAATGATAGGGGAGTTTCATTTACATTTGGTGCTGAGATGGTATCAGCGTTTCTTCAGAAGCATGATCTGGATCTTATATGTCGTGCTCATCAGGTTGTAGAAGATGGATATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTTTCAGCACCTAATTATTGTGGGGAGTTTGACAATGCCGGCGCTATGATGAGTGTTGATGAGACACTAATGTGCTCTTTTCAAATATTAAAGCCTGCTGATAAAAGAAGTACAACCACTGCGAAGCCTGGAAACTCTACGGCAGGTGTCAAGTCCTTCCTGGGTAAAGTTTGA 960 0.4188 MDQSVLDDIINRLLEVRGRPGKQVQLSESEIRQLCLASKEIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPHANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKTFTDCFNCLPVAALIDEKILCMHGGLSPELNSLDQIRNIQRPTDVPDSGLLCDLLWSDPSKEVQGWGMNDRGVSFTFGAEMVSAFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKRSTTTAKPGNSTAGVKSFLGKV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1233 319 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Bisa07g1233 319 FunFam Serine/threonine-protein phosphatase 1 303 - -
Bisa07g1233 319 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Bisa07g1233 319 SMART pp2a_7 26 296 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Bisa07g1233 319 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Bisa07g1233 319 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 303 - -
Bisa07g1233 319 CDD MPP_PP1_PPKL 5 294 - -
Bisa07g1233 319 Gene3D - 1 304 IPR029052 -
Bisa07g1233 319 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Bisa07g1233 319 SUPERFAMILY Metallo-dependent phosphatases 17 298 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1233 Bisa-ChrBisa07 31290568 31296746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1233 33 242 Calmodulin-binding Proteins AT5G63870 29.600 2.06e-28 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1233 07 31290568 31296746 Bisa07g1233 07 31290568 31296746 ECH