Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa07g1231 | ATGGCGAATAGGTGGTGGACGGAATCGGTGGGGCTGGCCGGAGTGGAGAACTCAGGGAACGGATCGTCGCAGATGAAGAAATCGGATCTGGGAATAGGCATGAATGAGGCTAGTAAGAACGGAGGGGTAATCGGGACCAACGAAGAGGAAGAGAAAGAGAACAGTACGGACGAGCCCAAAGAGGGGGCCATTGAAGTAGCGAGCAGGAGGCGCCCCAGAGGGCGCCCACCTGGTTCCAAGAACAAACCCAAACCCCCCATATTCGTCACCCGAGACAGCCCAAACGCGCTCCGAAGTCACGTCATAGAGATAGCCAATGGAGCCGACATAGCCGATAGCGTCGTCCAGTTCGCAAGGCGCCGCCAGCGAGGAGTCTGCGTCCTCAGCGCCGCCGGCACCGTTGCCAACGTCACCCTCCGGCAGCCCTCTGCCCCCGGCGCCGTCATGGCGCTCCACGGCCACTTCGACATATTGTCCCTGACCGGATCCTTCCTGCCGCCGCCGGCTCCTCCGGGCGCCGCAGGCCTGACGATCTACCTGTCTGGAGGGCAGGGCCAGGTCGTCGGCGGAGGGGTGGTGGGCTCACTGGTGGCGTCCGGGCCCGTAATGATTATGGCTGCCACGTTTTCCAATGCAACGTATGAGAGGTTACCCATTGAGGACGAAGAGGGAGGTAGCGGCGCTGGCGCTGGGTCGCCGCAGGGAATAGGAGCCGGGGAGGTGTCGTCGTCAATTAATCCGGGTTATAATGTTGCGCCGAATTTGCTTCCAAATGGGCAGCATTTGAACCATGAAGCTTATTCTTCTTGGGGTCACGGACATGGTCATGGGAGGTCACCTTATTAG | 846 | 0.6017 | MANRWWTESVGLAGVENSGNGSSQMKKSDLGIGMNEASKNGGVIGTNEEEEKENSTDEPKEGAIEVASRRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVIEIANGADIADSVVQFARRRQRGVCVLSAAGTVANVTLRQPSAPGAVMALHGHFDILSLTGSFLPPPAPPGAAGLTIYLSGGQGQVVGGGVVGSLVASGPVMIMAATFSNATYERLPIEDEEGGSGAGAGSPQGIGAGEVSSSINPGYNVAPNLLPNGQHLNHEAYSSWGHGHGHGRSPY | 281 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa07g1231 | 281 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 94 | 221 | - | - | |
| Bisa07g1231 | 281 | MobiDBLite | consensus disorder prediction | 13 | 29 | - | - | |
| Bisa07g1231 | 281 | MobiDBLite | consensus disorder prediction | 220 | 239 | - | - | |
| Bisa07g1231 | 281 | Gene3D | - | 97 | 225 | - | - | |
| Bisa07g1231 | 281 | FunFam | AT-hook motif nuclear-localized protein | 97 | 224 | - | - | |
| Bisa07g1231 | 281 | MobiDBLite | consensus disorder prediction | 1 | 93 | - | - | |
| Bisa07g1231 | 281 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 35 | 235 | IPR014476 | GO:0003680 | |
| Bisa07g1231 | 281 | MobiDBLite | consensus disorder prediction | 56 | 72 | - | - | |
| Bisa07g1231 | 281 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 98 | 211 | IPR005175 | - | |
| Bisa07g1231 | 281 | CDD | DUF296 | 98 | 165 | IPR005175 | - | |
| Bisa07g1231 | 281 | ProSiteProfiles | PPC domain profile profile. | 94 | 232 | IPR005175 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa07g1231 | Bisa-ChrBisa07 | 31241584 | 31242429 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa07g1231 | 1 | 281 | AT-hook Motif Nuclear Localized (AHL) Family | AT4G14465 | 56.040 | 5.74e-93 | 274 |