Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1228 ATGGAAGCCAATGAGAACCAACTGAACTACTACCATCATCACCAGCAGCAGCGGACCACCACCACCACCACTTCCACCGTCGCCGCCACGTCCTCGCCGACCAATGGCCTCTTGCCGAACGCCGATGGGTCCCACTTGATCTACCCTCATTCCGTGCCGTCCGCCGTCTCCTCCCAACTCGAACCCGCCAAGAGGAAGAGAGGGAGGCCCAGGAAGTACGGCACGCCAGAGCAAGCTCTAGCCGCTAAGAAAGCTGCCACCACCTCTTCTCACTCCTTTTCGCCCAGAGACAAGAAGCATCGTGGCTTGGGTACTGCCTCTGCTTCGTCTTCTTATTCCGCCTCTAAGAAATTTCACTCTCTTGCTCTTGGCAATGCAGGGCAAGGCTTCACCCCCCATGTCATTACTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTCACGCAACAAAGTAGACGTGAAATGTGCATTTTGTCTGCATCTGGTTCTATCTCCAATGCATCTCTTTGTCAGCCAGCAACCTCAGGAGGCAATATAACATATGAGGGTCGGTTTGAGATTATTTCACTTTCTGGTTCCTATGTCCGTACTGAACTTGGAGGGCGCACTGGTGGTCTCAGTGTATGCTTGTCTAGTACTGATGGCCAAATCATAGGTGGAGGAGTTGGCGGACCCCTTAAAGCTGCTGGTCCAGTTCAGGTCATTGTTGGTACATTTATTATCGACTCCAAGAAGGATTCTGGTGCTGGTGCCAGTGCCAAGGGTGATGCTTCTGCCAGCAAGTTGCTATCAACTGTTAGTGAATCAGTATCAGGTTTTGGTTTCCACCCCGCAGTTGACTCTGGCAGTGGGAATCCGATCCGGGGAAACAATGAGCATCAAGCTATTGGAGGAAGTCATTTCATGATGCAACAGTGTGGTCTGCATGTGACAACTTCAGGCCCCACAGACTGGGGGAGCCATCTGGATTCAAGAAACGCTGGCTATGAGCTGACAGGAAGAATAGGCCATGGGGCGCACCAAAGTCCTGAGAATGGGGACTATGAGCGAATCCCTGATTGA 1071 0.5173 MEANENQLNYYHHHQQQRTTTTTTSTVAATSSPTNGLLPNADGSHLIYPHSVPSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSHSFSPRDKKHRGLGTASASSSYSASKKFHSLALGNAGQGFTPHVITVAAGEDVGQKIMLFTQQSRREMCILSASGSISNASLCQPATSGGNITYEGRFEIISLSGSYVRTELGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQVIVGTFIIDSKKDSGAGASAKGDASASKLLSTVSESVSGFGFHPAVDSGSGNPIRGNNEHQAIGGSHFMMQQCGLHVTTSGPTDWGSHLDSRNAGYELTGRIGHGAHQSPENGDYERIPD 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1228 356 MobiDBLite consensus disorder prediction 1 37 - -
Bisa07g1228 356 ProSiteProfiles PPC domain profile profile. 126 269 IPR005175 -
Bisa07g1228 356 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 15 267 IPR039605 GO:0003680
Bisa07g1228 356 Pfam Plants and Prokaryotes Conserved (PCC) domain 132 242 IPR005175 -
Bisa07g1228 356 SUPERFAMILY AF0104/ALDC/Ptd012-like 128 243 - -
Bisa07g1228 356 MobiDBLite consensus disorder prediction 53 108 - -
Bisa07g1228 356 MobiDBLite consensus disorder prediction 336 356 - -
Bisa07g1228 356 CDD DUF296 131 242 IPR005175 -
Bisa07g1228 356 Gene3D - 132 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1228 Bisa-ChrBisa07 31094960 31102077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1228 19 356 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 52.589 1.76e-100 301