Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1225 ATGTTGAAGCTGTCTCGCATGCTGGCTTCCACTTCCAGGCATCAGTTGTCAGAAACTTTGTCATCGCAGAAAGTTGATCTTAGAGACAGCCTATGGCATCTGTGTGGTTCTACCCATTCAGCTGGCATTTCTACTACTACAAATAGTTATTCTGCTAAAGGGTATGCTTCAAGTCAAATATTTGCTCCTTATTCTGTCTACAAAGGCAAAGCTGCACTCTCATTGAGTCCCTGTCTTCCAACTTTCACCAAGTTGGATTCCGGGACCGTTGTAGTTGACCGCCGTGGTTCAATGATGATTACCTTCATACCTGCTATTGGTGAGCGCAAATATAACTGGGAGAAGAAACAGAGATTTGCTCTCTCAGCAACGGAGGTTGGTTCTTTGATAAGCATGGGCCCCACAGATTCCTGTGAATTCTTTCATGATCCTGCAATGTTATCAAGTAATGCTGGTCAAGTCAGAAAGAGCTTATCCATTAAGCCTCATGCAGACAATTCTGGCTACTTCATGTCCCTGACTGTTGTCAACAACATTTTAAAAAACAAAGAATTCTTAACTGTTCCTGTCACAACTGCTGAGTTTGCTGTGATGAAGACTGCTTGTAATTTTGCATTGCCACACATTATGGGTTGGGATCGTATGACTCACGAGCAATCCAGAGGCATGGCTAGTAAAGTATCAAAGGCAGACCCACAAGTTTTGGACTTGGAGTGGGAAAAGTGA 726 0.4325 MLKLSRMLASTSRHQLSETLSSQKVDLRDSLWHLCGSTHSAGISTTTNSYSAKGYASSQIFAPYSVYKGKAALSLSPCLPTFTKLDSGTVVVDRRGSMMITFIPAIGERKYNWEKKQRFALSATEVGSLISMGPTDSCEFFHDPAMLSSNAGQVRKSLSIKPHADNSGYFMSLTVVNNILKNKEFLTVPVTTAEFAVMKTACNFALPHIMGWDRMTHEQSRGMASKVSKADPQVLDLEWEK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1225 241 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 12 241 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bisa07g1225 241 Gene3D Transcriptional Coactivator Pc4; Chain A 51 223 IPR009044 GO:0003677|GO:0006355
Bisa07g1225 241 SUPERFAMILY ssDNA-binding transcriptional regulator domain 58 221 IPR009044 GO:0003677|GO:0006355
Bisa07g1225 241 Pfam Whirly transcription factor 66 200 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1225 Bisa-ChrBisa07 31064885 31069525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1225 12 241 Whirly Transcription Factor Family AT1G71260 59.746 6.41e-93 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bisa07g1225 Whirly 3.2e-57 CL0609