Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1212 ATGACGATGGAGACCAATGCACGTACACTGTTTGTGATATTTACTCTTTCAACTGCTCTATTGGTTTCTCCATCTCAAGGGCTCAATGCAGAAGGTAAATACCTTCTAGATATCAAGAGCTCATTGGTCGACATTGATAACCATCTGGTTAACTGGCACTCGAGCGATTCTACACCTTGTGGGTGGAAAGGTGTGAAATGCAGCACTGGTGACAACGACAACCCTGTGGTGAAGTCTCTTGATTTGAATTCATTGAATCTCTCTGGTTCTTTGGCTCCCAGTATCGGAGGGTTGGTTCACTTGGCTTATCTCAATCTCTCTGATAATTCTTTATCAGGGATTATACCTAAGGAAATTGGGAACTGCTCAAGTCTGGAAGTTCTCAGTCTCAATAACAATCAATTTGGAGGCCAAATTCCTGCTGAAATAGGTAGGCTTTCTTGTTTAACGTACTTGAATGTTTGCAATAACATCCTCTTTGGATCTTTGCCTGAGGAAATTGGTAACCTCTCCTCACTTTTAGAATTTATTGCATACACTAATAATATAAGTGGATCTTTGCCGAGTTCTATTGGGAGACTTCAAAGATTGAGACTCTTCCGTGCTGGGCAGAATATGATATCAGGGATTTTACCTCTTGAGATTGGTGGATGTCAAAGCTTGAAGTATCTTGGTCTAACTCTTAATCAGATAACAGAGCTTGGAAACTGTACAAACTTGGAGATTCTTGCTCTGTATCAGAATAATCTTGTGGGAGCGATTCCCAAGGAACTGGGAAACCTTGTGCTTTTAAAAAAGTTGTACCTTTACAGAAATAAGTTGAGTGGAAAGATCCCAAGAAAGGTTGGGAACCTTTCTCTGGCAACAGAAATTGATCTATCAGAGAATCTGCTTACAGGAGATATACCTATTGAGTTGGTTCAAATCACAGGGCTGCAATTGCTTTTCCTCTTTCAAAACAAACTCACTGGTATAATACCTAATGAGTTAATCAGCTTGAGAAACCTGACTAACCTGGATCTCTCTATCAATTATCTCACAGGTCCTATTCCCCTTGGATTTCAGAACTTGACCAACTTGATCATGCTGCAACTTTTCCACAACTCTCTAAGTGGTACAATTCCACAAGCACTAGGACTAAATAGCCCACTATGGGTGGTTGATTTATCTGAAAACTACTTGGTGGGAAGAATTCCAACCCATCTTTGCCAACATTATAACTTGAACATGTTGAACTTGGGATTAAATAAACTCACTGGAAACATCCCTTATGGTATCACAAACTGCCAGTCCTTGGTGCAGCTTCGTCTCCTTGGAAACAACCTCAGAGGAAAGTTTCCTTGTAATTTGTGCCAACTTGTAAATCTCACTGTAGTAGAGTTGGATCAGAACGGCTTCACTGGCCCTATTCCTTCAGAAATTGGTAACCTCTCACAGTTGGTCACATTTAATGTCTCCTCTAATAACTTTCGCGGAAGAATACCACTGGAACTGTTCAATTGCAGGAAGCTTCAACGGCTGGATCTCAGCCATAATAACTTTGTGGATGCTTTTCCACCCGAGATAGGACCCCTTTCACAATTGGAGCTTCTCAAGCTCTCAGAAAATCATTTTTCTGGGAATATTCCTGTGGCACTAGGAAAGCTCGTACGACTGACAGAGTTACAAATGGGCGGCAACTCATTCTCTGGTGCCATACCAGATGAGTTAGGTACCCTTTCAAGCTTACAGATCACACTTAATCTCAGTTATAATAACTTGTCTGGCAACATCCCTTTTAAGCTTGGGAATCTTGGTATGCTTGAATCTCTCATTCTCAACAACAATCATTTGAGTGGTGAAATTCCAGCCTCTTTTGTGAAACTCTCTAGTTTACTATCCTGTAACTTCTCTTACAATGATCTAACCGGGCCTTTACCTTCCTCACCCCTCTTTCATAAAATGGCGATCAACAGCTTTTCTGGGAACAAAGGCCTATGTGGAGGAAGGCTTGGCCCTTGTGCAACATCAAATTCACTCGCAGCTCCTTCAAATAAACTAGGGAAAGTTGGTGTAGCCGCATTCACTGTGAGTGGGATTTCTCTGGTTTTAATTGCAGTGATTATATATCTCATGAAACGTCCAATGGATTCCATTGTGCCACATCAGGATATAGATACATCACCCTCTCTTCCAGCTTTAGACCTGTATTTCTTTCCCAGAGAGGAGTTAACTTTCAAAGACATGGTCGAGGCCACTCAGAACTTTGACGACAGATTTGTGATTGGAAGGGGAGGTAGTGGAACAGTATACAAGGCAGAATTATCAAACGGTCATACAATCGCCATCAAGAAGCTCATATCAAGCAGTGAGGGCGTCAACGTAAAAGACAGCTTCATCGCTGAAATCAAAACTCTGGGAAAAATACGTCACCGGAATATTGTGAAATTATATGGTTTTTTCAGATTTCGAGATTGTAACATACTTGTTTACGAGCACATCTCGAGAGGAAGTTTAGGGGAGTTACTTCATGGAGAAGGATGTTATAGTTTGGATTGGCAAACTCGGTTTAGGATTGCCCTTGGAACAGCACAAGGGCTATCGTATCTGCACTACGATTGCAAGCCCAGGATCCTGCACCGTGACATAAAGCCCAGCAACATTCTCGTTGACGATGAATTTGAAGCTCATGTCGGGGACTTCGGCTTGGCAAAGCTGATGGACATGTCGCGATCCACATCTAGATCAGCGTCCGCAGTCGTAGGTTCTTATGGCTATATCGCCCCTGGTGAGCCACCCTACAATCCCCATGCTTTTTTACATCTTCATGTTGATGAAACCGAATATGCATACAGCATGAAGGTGACAGAAAAAGGCGATGTGTACAGCTATGGGGTAGTGCTGTTAGAGTTGACGACTGGGAAGCCGGCGGTCCAACCGGTCGAGCAAGGAGGTGACCTTGCGACATGGCTCAGAAATCACATTCACGCCCATTCATTCTCGCTTGACATTCTCGACGCTCGCTTGGATCTCAAAGATCAAATCAATGTGGATCAAATGTTTCACGTGTTGAAAATCGCTCTTCTCTGCACCCACTTGTCTCCTTCTGCTCGCCCAACCATGCTTCAAGTTGTTTCAATGCTTATGGGATCTGGCATTCTACCCACACAAAACTGA 3156 0.4278 MTMETNARTLFVIFTLSTALLVSPSQGLNAEGKYLLDIKSSLVDIDNHLVNWHSSDSTPCGWKGVKCSTGDNDNPVVKSLDLNSLNLSGSLAPSIGGLVHLAYLNLSDNSLSGIIPKEIGNCSSLEVLSLNNNQFGGQIPAEIGRLSCLTYLNVCNNILFGSLPEEIGNLSSLLEFIAYTNNISGSLPSSIGRLQRLRLFRAGQNMISGILPLEIGGCQSLKYLGLTLNQITELGNCTNLEILALYQNNLVGAIPKELGNLVLLKKLYLYRNKLSGKIPRKVGNLSLATEIDLSENLLTGDIPIELVQITGLQLLFLFQNKLTGIIPNELISLRNLTNLDLSINYLTGPIPLGFQNLTNLIMLQLFHNSLSGTIPQALGLNSPLWVVDLSENYLVGRIPTHLCQHYNLNMLNLGLNKLTGNIPYGITNCQSLVQLRLLGNNLRGKFPCNLCQLVNLTVVELDQNGFTGPIPSEIGNLSQLVTFNVSSNNFRGRIPLELFNCRKLQRLDLSHNNFVDAFPPEIGPLSQLELLKLSENHFSGNIPVALGKLVRLTELQMGGNSFSGAIPDELGTLSSLQITLNLSYNNLSGNIPFKLGNLGMLESLILNNNHLSGEIPASFVKLSSLLSCNFSYNDLTGPLPSSPLFHKMAINSFSGNKGLCGGRLGPCATSNSLAAPSNKLGKVGVAAFTVSGISLVLIAVIIYLMKRPMDSIVPHQDIDTSPSLPALDLYFFPREELTFKDMVEATQNFDDRFVIGRGGSGTVYKAELSNGHTIAIKKLISSSEGVNVKDSFIAEIKTLGKIRHRNIVKLYGFFRFRDCNILVYEHISRGSLGELLHGEGCYSLDWQTRFRIALGTAQGLSYLHYDCKPRILHRDIKPSNILVDDEFEAHVGDFGLAKLMDMSRSTSRSASAVVGSYGYIAPGEPPYNPHAFLHLHVDETEYAYSMKVTEKGDVYSYGVVLLELTTGKPAVQPVEQGGDLATWLRNHIHAHSFSLDILDARLDLKDQINVDQMFHVLKIALLCTHLSPSARPTMLQVVSMLMGSGILPTQN 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1212 1051 Gene3D Transferase(Phosphotransferase) domain 1 827 1045 - -
Bisa07g1212 1051 Pfam Leucine rich repeat 77 135 IPR001611 GO:0005515
Bisa07g1212 1051 Gene3D Ribonuclease Inhibitor 27 179 IPR032675 -
Bisa07g1212 1051 SMART serkin_6 749 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1212 1051 Gene3D Phosphorylase Kinase; domain 1 722 826 - -
Bisa07g1212 1051 FunFam Leucine-rich repeat receptor protein kinase EMS1 496 577 - -
Bisa07g1212 1051 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 27 189 - -
Bisa07g1212 1051 Gene3D Ribonuclease Inhibitor 180 232 IPR032675 -
Bisa07g1212 1051 PANTHER UNNAMED PRODUCT 233 970 - -
Bisa07g1212 1051 FunFam Leucine-rich repeat receptor-like protein kinase 578 669 - -
Bisa07g1212 1051 SMART LRR_typ_2 123 146 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 598 622 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 98 122 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 357 381 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 549 573 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 333 356 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 502 525 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 261 285 IPR003591 -
Bisa07g1212 1051 SMART LRR_typ_2 477 501 IPR003591 -
Bisa07g1212 1051 ProSiteProfiles Protein kinase domain profile. 749 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1212 1051 ProSitePatterns Protein kinases ATP-binding region signature. 755 778 IPR017441 GO:0005524
Bisa07g1212 1051 Pfam Protein kinase domain 754 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1212 1051 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Bisa07g1212 1051 FunFam Os07g0541700 protein 829 916 - -
Bisa07g1212 1051 Gene3D Ribonuclease Inhibitor 233 380 IPR032675 -
Bisa07g1212 1051 Gene3D Ribonuclease Inhibitor 381 671 IPR032675 -
Bisa07g1212 1051 FunFam Inactive leucine-rich repeat receptor-like protein kinase 232 495 - -
Bisa07g1212 1051 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 715 826 - -
Bisa07g1212 1051 ProSiteProfiles Leucine-rich repeat profile. 220 241 IPR001611 GO:0005515
Bisa07g1212 1051 SUPERFAMILY L domain-like 44 374 - -
Bisa07g1212 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 871 883 IPR008271 GO:0004672|GO:0006468
Bisa07g1212 1051 SUPERFAMILY Protein kinase-like (PK-like) 727 1042 IPR011009 -
Bisa07g1212 1051 SUPERFAMILY RNI-like 266 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1212 Bisa-ChrBisa07 30710747 30714724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1212 30 1048 Receptor kinase-like Gene Family AT5G65700 37.524 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa07g1212 Pkinase 2.3e-40 CL0016