Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1206 ATGGCTGATCAAAATCTGTCGGAGCTGAACAGAGGCGTGAAGAATAGTACTATCGTGACGGCGACGGCAGGCATCCACCAGTGGGCGAGGCCGCGGTGCCCGGCGCCGTTTCTGGTGAAGACGTATGAGCTAGTGGAGGAGGAGGAGGAGGAGGAGGGGGGCGAAGACGAAGACGAAGACGAGAGGAGGAGGAGAGTGGTGTCATGGAATGAGGAAGGAGACGGGTTCGTTGTGTGGTGTCCGGCGGAGTTCTCAGAACAAACCTTGCCGAGGTATTTCAAGCACAACAATTTCTCCAGCTTCATCCGTCAACTCAATACCTATGGATTCAAGAAAGTATCATCCAAAAGGTGGGAATTCAAGCACGAGAAATTTCAAAGAGGCTGCAAGGAATTGCTAGTGGAAATCACCAGAAAGAAATGCGAGCCAAGCATCTTCCCTTCATACCTAAAGTCTTATTCAGAAGAAAATGCAGTGAGTTCTACAGGAGAAAACAATCATCATCATCATCATCAACAACAACAATTTCTGATGGAGGAGAACAAGAATCTGAAGAAGGAGAGGTTGGAATTACAGACACAGATTGCTCACTTCAAAGCTCTAGAAATGAAGTTATTGGAGTGTGTGTCCCAATATATGGGCAGAAACGAAAACAAAGTGAGGAGAATGTGTTGA 675 0.4711 MADQNLSELNRGVKNSTIVTATAGIHQWARPRCPAPFLVKTYELVEEEEEEEGGEDEDEDERRRRVVSWNEEGDGFVVWCPAEFSEQTLPRYFKHNNFSSFIRQLNTYGFKKVSSKRWEFKHEKFQRGCKELLVEITRKKCEPSIFPSYLKSYSEENAVSSTGENNHHHHHQQQQFLMEENKNLKKERLELQTQIAHFKALEMKLLECVSQYMGRNENKVRRMC 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1206 224 FunFam Heat stress transcription factor A-6b 30 140 - -
Bisa07g1206 224 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 33 202 IPR027725 -
Bisa07g1206 224 MobiDBLite consensus disorder prediction 162 176 - -
Bisa07g1206 224 Pfam HSF-type DNA-binding 37 139 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1206 224 ProSitePatterns HSF-type DNA-binding domain signature. 89 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1206 224 Coils Coil 174 201 - -
Bisa07g1206 224 MobiDBLite consensus disorder prediction 157 176 - -
Bisa07g1206 224 SUPERFAMILY "Winged helix" DNA-binding domain 34 139 IPR036390 -
Bisa07g1206 224 SMART hsfneu3 33 139 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g1206 224 MobiDBLite consensus disorder prediction 46 65 - -
Bisa07g1206 224 Gene3D - 30 140 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1206 Bisa-ChrBisa07 30596370 30599738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1206 15 214 HSF AT5G62020 34.821 2.16e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa07g1206 HSF_DNA-bind 2.3e-30 CL0123