Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1189 ATGGCGAGTCGGTCCGGGTCCTCTTCGAAGTCATTGATCGTCACCAACACGCCGTCGCAGGACCTTGCTCTCACCAATCTCGCCTTCTGCTCATCCTCTGATCTTCAGAACTTCGCCGTCGCGGGTTACAAAAACATACATACTGCTCACGAAAGCATACGCAGTGGCCATATTGCACTGAATTCGATTCAACGTCGATGTGTTAAAGTTTCTGCCGCTGAATCGATACCTGTAAGCAGATTCGTCCCACCAGACAATTTCAACCTGGCGATGCTAACCCTTGATTTGGAATTCATCAAGAAGGGAACTAGAAGTGAACAGATTGATGCAGTTCAGCTGGCTAAGCAACTTAAAAAGAGATTTGTAAACCAGTTGTCACTCTGCATTCTTAATCCTAAAATCCTATCAGGAGAAAATGTTTATGTTCTGGTAGCCCTTCTCAAGACTAGTATTGAAGAATCTGAGCATGTAATTGGATCAAAGGTTATGACTGCAGGACAGAAAGTATTGTTTGAATTTCAGGGAAATAATTATAGTTTTACAGTCAATCAAGCTGCTGTTGAGGGTAATGAAAATTCTAAGGCTCTTGAAAGAGGGATGCTATCAAATGACACATATGTTGTTTTTGAAGCATCTCGTGATAGCGGAATTAAGATTGTCAATCAGCGTGAGGCTGCAACAAGCAACATTTTCAAGCATAAAGAGTTCAATCTTCAGTCACTGGGTATTGGGGGCTTGACTGCAGAGTTTGCAGATATATTTCGAAGAGCTTTTGCATCTCGAGTTTTCCCTCCCCATGTTACATCTAAATTAGGGATCAAGCATGTGAAGGGCATGCTGCTTTATGGGCCTCCTGGCACTGGAAAAACTCTTATGGCACGTCAAATTGGAAAAGTTCTAAATGGGAAAGAACCAAAGATTGTAAATGGCCCTGAAGTCTTGAGTAAATTTGTTGGTGAAACTGAAAAGAATGTGAGGGACCTCTTTGCTGATGCTGAGCAGGAACAGAGGGCTCGAGGGGATGAAAGTGATTTGCATGTCATAATTTTTGATGAGATTGACGCTATTTGTAAGTCAAGAGGTTCAACTCGAGATGGAACTGGAGTTCATGATAGTATTGTGAACCAACTTCTTACTAAGATAGATGGTGTGGAGTCGCTAAATAATGTCTTGCTTATTGGAATGACCAACAGAAAGGACATGCTTGATGAAGCTCTTCTGAGACCTGGGCGCCTAGAAGTCCAAGTTGAGATAAGCCTTCCTGATGAAAATGGCCGATTGCAGATTCTTCAAATTCATACAAACAAGATGAAGGATAATTCTTTTCTATCTCCTGATGTGAACCTTCAAGAACTTGCCGCTCGAACAAAAAACTATAGTGGTGCAGAACTTGAAGGTGTTGTGAAAAGTGCAGTCTCATTTGCTTTGAATAGACAACTGAGTCTAGATGATCTCACCAAGCAAGTGGAGGAAGAGAATATCAAGGTTACAATGGATGATTTCTTGAATGCACTTCAAGAAGTTGTTCCTGCATTTGGAGCTTCAACTGATGACCTTGAAAGATGCAGACTTGGTGGCATGGTGGACTGTGGCGATCGACATAGGCACATTTATCAAAGAGCTATGCTTCTTGTGGAACAAGTTAAAGTGAGTAGAGGAAGCCCACTTGTTACTTGTCTTTTGGAAGGCCCAAGTGGCAGTGGTAAAACTGCACTTGCAGCTACTGTTGGCATTGACAGCGATTTCCCCTATGTCAAGATTGTTTCAGCTGAATCAATGATTGGTCTACATGAAAGCACTAAATGTTCGCATATTATCAAGGTTTTTGAGGATGCATACAAGTCCCCATTGAGCGTCATTATTCTTGATGACATTGAGAGATTACTGGAGTATGTGGCCATTGGCCCAAGGTTTTCGAATTTGATTTCTCAGACACTATTGGTCCTGCTAAAACGGCTTCCTCCCAAGGGGAAAAAGCTCCTGGTTATTGGTACAACAAGTCAATTGATCTTCTTGGAATCAATTGGATTCTGTGATATTTTCTCTGTCACTTACCATGTTCCTACGTTGAACACAAATGATGTTAAGAAGGTTCTAAAACAGTTGAATGTTTTTGCTGAGGATGATGTTGATGCTGCTGCAGAGGCCTTGAATGATATGCCTATCAAGAAGCTATACACGTTGATTGAGATGGCAGCCCAAGGGGAACAAGGTGGATCTGCGGAAGCGGTCTTTTCTGGCAAAGCGAAGATTGACATTTCCCACTTCTATGATTGCCTTCAGGATGTTGTCCGAGTATAA 2301 0.4207 MASRSGSSSKSLIVTNTPSQDLALTNLAFCSSSDLQNFAVAGYKNIHTAHESIRSGHIALNSIQRRCVKVSAAESIPVSRFVPPDNFNLAMLTLDLEFIKKGTRSEQIDAVQLAKQLKKRFVNQLSLCILNPKILSGENVYVLVALLKTSIEESEHVIGSKVMTAGQKVLFEFQGNNYSFTVNQAAVEGNENSKALERGMLSNDTYVVFEASRDSGIKIVNQREAATSNIFKHKEFNLQSLGIGGLTAEFADIFRRAFASRVFPPHVTSKLGIKHVKGMLLYGPPGTGKTLMARQIGKVLNGKEPKIVNGPEVLSKFVGETEKNVRDLFADAEQEQRARGDESDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLRPGRLEVQVEISLPDENGRLQILQIHTNKMKDNSFLSPDVNLQELAARTKNYSGAELEGVVKSAVSFALNRQLSLDDLTKQVEEENIKVTMDDFLNALQEVVPAFGASTDDLERCRLGGMVDCGDRHRHIYQRAMLLVEQVKVSRGSPLVTCLLEGPSGSGKTALAATVGIDSDFPYVKIVSAESMIGLHESTKCSHIIKVFEDAYKSPLSVIILDDIERLLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKLLVIGTTSQLIFLESIGFCDIFSVTYHVPTLNTNDVKKVLKQLNVFAEDDVDAAAEALNDMPIKKLYTLIEMAAQGEQGGSAEAVFSGKAKIDISHFYDCLQDVVRV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1189 766 FunFam Vesicle-fusing ATPase 421 508 - -
Bisa07g1189 766 Gene3D - 230 420 IPR027417 -
Bisa07g1189 766 Gene3D - 8 81 - -
Bisa07g1189 766 Pfam AAA+ lid domain 446 501 IPR041569 -
Bisa07g1189 766 Pfam ATPase family associated with various cellular activities (AAA) 560 668 IPR003959 GO:0005524|GO:0016887
Bisa07g1189 766 Pfam ATPase family associated with various cellular activities (AAA) 279 419 IPR003959 GO:0005524|GO:0016887
Bisa07g1189 766 SUPERFAMILY ADC-like 9 81 IPR009010 -
Bisa07g1189 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 519 736 IPR027417 -
Bisa07g1189 766 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 518 IPR027417 -
Bisa07g1189 766 CDD RecA-like_NSF-SEC18_r1-like 242 418 - -
Bisa07g1189 766 FunFam Vesicular-fusion ATPase SEC18 231 421 - -
Bisa07g1189 766 ProSitePatterns AAA-protein family signature. 390 408 IPR003960 GO:0005524|GO:0016887
Bisa07g1189 766 SMART AAA_5 555 676 IPR003593 GO:0016887
Bisa07g1189 766 SMART AAA_5 275 422 IPR003593 GO:0016887
Bisa07g1189 766 PANTHER VESICULAR-FUSION PROTEIN NSF 11 765 IPR039812 GO:0016887|GO:0035494
Bisa07g1189 766 FunFam vesicle-fusing ATPase isoform X1 517 688 - -
Bisa07g1189 766 Gene3D - 421 508 - -
Bisa07g1189 766 Gene3D - 518 688 IPR027417 -
Bisa07g1189 766 Gene3D - 85 219 - -
Bisa07g1189 766 SUPERFAMILY Cdc48 domain 2-like 160 224 IPR029067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1189 Bisa-ChrBisa07 30169165 30188997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1189 270 486 Calmodulin-binding Proteins AT3G56690 39.819 5.06e-40 157