Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1181 ATGATGGAGTTTAACCATAAAAATTCTTCCACTTCTTCCAGAACTGATAGGAAGTTCATAGAGAGAAATCGAAGAAACCAAATGAAGGCCCTCTACTCCGAACTCCACTCTCTCGTCCCTCGTCAAACCTCCAAGGAGGTTATTTCGGTGCCAGATCAGCTAGACGAAGCGACGAGCTACATAAAGAAGCTTCAGGTGAAGCTGGAGAGGATGAAGGAGAAGAAAGACATGCTAATGGGGATCAATAGGAGTAATAACGATGATGATAATGACCGGTGCTTGGATAATAGAAGAATGAAAATGGGGTTAAGATCACCCCAAATTGAGATCCACCTTATGGGTTCAGCATTGGCGATTGCTGTGATTACTGGGTTGGATTGCCAGTTCATTTCCAACGAGATCGTTCGTGTTCTTCACGAAGAAGCAGCTGATATTGTTAATGCCAGTTACACAGTCAGTAAAGATGCAGTCTTTCATATCATACATTGTCAGGTAGGAGAATCTAGGGACAGCGTTGGGAGAATATCGGAGAGATTGAAGATTTTGTGTGGTTCAGGTGCATTTTGA 567 0.4303 MMEFNHKNSSTSSRTDRKFIERNRRNQMKALYSELHSLVPRQTSKEVISVPDQLDEATSYIKKLQVKLERMKEKKDMLMGINRSNNDDDNDRCLDNRRMKMGLRSPQIEIHLMGSALAIAVITGLDCQFISNEIVRVLHEEAADIVNASYTVSKDAVFHIIHCQVGESRDSVGRISERLKILCGSGAF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1181 188 Coils Coil 54 81 - -
Bisa07g1181 188 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 64 IPR011598 GO:0046983
Bisa07g1181 188 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 180 - -
Bisa07g1181 188 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 10 79 IPR036638 GO:0046983
Bisa07g1181 188 SMART finulus 18 70 IPR011598 GO:0046983
Bisa07g1181 188 Pfam Helix-loop-helix DNA-binding domain 14 65 IPR011598 GO:0046983
Bisa07g1181 188 Gene3D - 2 90 IPR036638 GO:0046983
Bisa07g1181 188 FunFam Transcription factor bHLH162 5 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1181 Bisa-ChrBisa07 29952970 29953903 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1181 2 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.857 1.01e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1181 HLH 1.1e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1181 07 29952970 29953903 Bisa07g1181 07 29952970 29953903 CCT