Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1166 ATGAAGCAGGGGCAAGAAGGAGGAGAGATGACTATGAATACTAATAAGCCTCAGGGGCAGCAACCCCAGAAATGTCCTCGATGTGACTCGCTCAACACCAAGTTCTGCTATTACAACAATTATAGCCTCTCTCAGCCTCGCTACTTCTGTAAGACCTGTAGAAGGTACTGGACACAAGGCGGAACCTTAAGGAACGTCCGCGTCGGCGGTGGCTGCCGCAAGGCCAAGCGCACCAAAAGCTCTGCCGCCACGTCGTCTTCCGCCGCCGACCCACCACAACAACAACCGCCGCCAGCTGCAGCCGCCCAGAGAGACCCTTCGTCAGCCGTGGCTTCTGCTTCTTCTGCTCCGACTCCGGCCTTGGCGGCCCCGGAGGCTCGGGCAATCAGCCCGTTTTTTCACGGTGGTGATGGGTATTTGTCTTCTCTAGCGGCGATTCAATCTATGAACCCATCTCAGCCGTTCAATCAAATGGGTACTTCCTCTTCTAATTTGAGTCTTCTATCTGGGTTTGGTGTTCCTTCTCTGGGCTCACCAATTCGTCCATCTCAGCAATTTTATCAAATGGGTGTAATCAGAGACAAGGAAGAAGACGCTCTGTTCGAAGCAGAGCAAGGTTTGATTCAATCAAGCAATTGGCCTGGAAGTTTCATCAGTGATACTAGCCATAAAGGATCCGATGCTTCTCTGTGGAGTAGGACTACTGTGAGCACCAACACTTCCATAGGCGGTAGTTCTAAGAGTAACAACGATGCTACTGCTAGTGGATCACTTTCTTTGATCCCAAATCCTCACTGGCCTGATCTTCATGGGTATGACCCTCCTCCATAA 831 0.5126 MKQGQEGGEMTMNTNKPQGQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKTCRRYWTQGGTLRNVRVGGGCRKAKRTKSSAATSSSAADPPQQQPPPAAAAQRDPSSAVASASSAPTPALAAPEARAISPFFHGGDGYLSSLAAIQSMNPSQPFNQMGTSSSNLSLLSGFGVPSLGSPIRPSQQFYQMGVIRDKEEDALFEAEQGLIQSSNWPGSFISDTSHKGSDASLWSRTTVSTNTSIGGSSKSNNDATASGSLSLIPNPHWPDLHGYDPPP 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1166 276 ProSitePatterns Zinc finger Dof-type signature. 25 61 IPR003851 GO:0003677|GO:0006355
Bisa07g1166 276 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 198 IPR045174 GO:0003700|GO:0006355
Bisa07g1166 276 ProSiteProfiles Zinc finger Dof-type profile. 23 77 IPR003851 GO:0003677|GO:0006355
Bisa07g1166 276 Pfam Dof domain, zinc finger 21 77 IPR003851 GO:0003677|GO:0006355
Bisa07g1166 276 MobiDBLite consensus disorder prediction 236 260 - -
Bisa07g1166 276 MobiDBLite consensus disorder prediction 236 276 - -
Bisa07g1166 276 MobiDBLite consensus disorder prediction 70 116 - -
Bisa07g1166 276 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1166 Bisa-ChrBisa07 29644979 29645809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1166 20 92 C2C2-Dof Transcription Factor Family AT5G60850 75.342 1.22e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g1166 zf-Dof 1.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1166 07 29644979 29645809 Bisa07g1166 07 29644979 29645809 CCT
Bisa07g1166 07 29644979 29645809 Bisa07g1166 07 29644979 29645809 ECH