Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1165 ATGGTGGGTAGCTCTGAGAAAATGGTGCTCGTCCCTCCAACCAATAACGAATGGCCACAGGTCGATGATCAGAAGGTGTCGATGGGATCATCTGGTAGGACAACAATAATGGAAAAGCCCGCAGGTCAAGAGTCTCTCAAGTGTCCTCGCTGTGATTCTTCAAACACCAAGTTCTGCTACTACAACAACTATAGCTTGTCTCAGCCAAGGCACTTCTGCAAATCCTGCAAGCGATATTGGACCAGAGGAGGCACTCTCAGGAACGTCCCTGTGGGTGGAGGCTGCAGGAAGAACAAGCGCGTGAAGCGCCAAAACCAAACCCCTTCTTCTGCTTCTGATAATACTCCTCCTCGTCCTCCTCCTTCTTCCTCTTCTTGTTCTACTTCAAGCCTTCCTTCTCAACCCCAGATCCATAACCACATGAGTCCTCTGTTTTATGGGTTACCCCAGATACATAATCATCTCAATTCTGGCTACGATCATCTTCCTGGATTGGGTTTTTCATCTCGGTTTGCTTCAAATGATGCTCTTGTGTCCAGTTATAATTCCATCTTTGGTAATTCTTCTTCTTGTTCTGCAACTTCTCTGGCTTCCCTGCTGAACCCTAGTGCCCTACAGCAGCAACAGAAGTTCATCAATGGCGGTGTTGTCAAGGATGATAACACCTTCCAGGGCTTAGCCCCTCTAGAAGAAGTCATGAAAGTTGAAGAACCACAAGACCAGATCATAGGGGGATTGTCGGATTATTCGCCTTATTATTGGAACGCAGCGACTACAGCCATGGGTGCTTGGAGTGATCAAGCTAATAATGTTGGCCCTTCAGTCACCTCTCTGATCTAG 840 0.4738 MVGSSEKMVLVPPTNNEWPQVDDQKVSMGSSGRTTIMEKPAGQESLKCPRCDSSNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPVGGGCRKNKRVKRQNQTPSSASDNTPPRPPPSSSSCSTSSLPSQPQIHNHMSPLFYGLPQIHNHLNSGYDHLPGLGFSSRFASNDALVSSYNSIFGNSSSCSATSLASLLNPSALQQQQKFINGGVVKDDNTFQGLAPLEEVMKVEEPQDQIIGGLSDYSPYYWNAATTAMGAWSDQANNVGPSVTSLI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1165 279 ProSitePatterns Zinc finger Dof-type signature. 48 84 IPR003851 GO:0003677|GO:0006355
Bisa07g1165 279 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 37 192 IPR045174 GO:0003700|GO:0006355
Bisa07g1165 279 MobiDBLite consensus disorder prediction 17 32 - -
Bisa07g1165 279 MobiDBLite consensus disorder prediction 1 32 - -
Bisa07g1165 279 ProSiteProfiles Zinc finger Dof-type profile. 46 100 IPR003851 GO:0003677|GO:0006355
Bisa07g1165 279 Pfam Dof domain, zinc finger 44 100 IPR003851 GO:0003677|GO:0006355
Bisa07g1165 279 MobiDBLite consensus disorder prediction 91 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1165 Bisa-ChrBisa07 29629958 29630964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1165 46 279 C2C2-Dof Transcription Factor Family AT1G28310 38.667 5.21e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Bisa07g1165 zf-Dof 1.5e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1165 07 29629958 29630964 Bisa07g1165 07 29629958 29630964 CCT
Bisa07g1165 07 29629958 29630964 Bisa07g1165 07 29629958 29630964 ECH