Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1155 ATGAATGCAGTGAAGGCAGCTAGTGGTCTTGACTTTGGCTGCCTCAGATCTGACAGTGATTTGAGCCAACCTATGGAGTCTGAAGGGCAACAAAGGGATTTGAGGCCAGTTTCTTGTGGGGCAGAAAACCCTAATATGGTCTGTGTGGAAAAGAATGACTCATGTAAGATTCTTACAACGAAAAAGGAAGATTTTTACCTGAAACATGTAACTTCAAGTAGTCCAAATTCAAGAGATATTGTGGTTACTGCTGAAGATGATATACATCATCAATTAAATGTTGATAATAAAAGTAATGGATCCTCTCTACAAAGTAAAACCTTTGTAGGATGCCATGAACCAAGTTGTGATAGCAAGGCTTACTCATGTGGTGTTAAAGATATGGATTCCGGTACAGCCAAGTTATTCAATGATACTGGAAAAGATGTGGCTATTGACTTCCGGCAAAGAGACTGCTTTCTTGAGGATGCCAATGTGACTCAGAATCCTATGAACCAAATAAAGCAGTTGGAGGTAGAGTCTGGGGATGCAATGAACCAAATGACATCAAGGTTTATGTCCCCTGAAATGAGGACTCGAAGTCTTTCTCCCAGTGCCAATATGGAAGATGGAAACAAACGGCCAGCAATTGTTTGTAACTTTTTTGCTAAAGGATGGTGCATCAGAGGTAGTTCATGTAGGTTTCTACATATAAAAGATTGTGTGAATAATACTGAACAGCTGGCTGAAGGAGACTTAGCTACTACAAATTGGAAGAGAGAAGTGCAATTGGAGGAAGGTCTTAGAGACAGTGCTGAGCCACCAAAGATGCCTGATGCTCCAGTTTCGTTGGCTGCTTCACCGGTAAGCACATCTTTGCATTCTTCTGAAGTTTCTCGAAAAGAGATCATCCAGGATGAGCAAGAAGCAAGCCCAAGTCGGCATTCATCTCAAGATAAGCAGAAGTTTCCAGTGCTTCCTAAAGAGGATTCATCTTCTAAGAACCAAGCCTTACCAATTGGTAGAGAAAGTTCTAAGTCAATGGACAGCTTGTTTCCTGAAAATAGATCTAGGTTTGCATCAAGCAACCATTTCAGCATGAATCTCTCCTCCTATCCACCCCGTACAGAGGGATTGGCCACCATTCAGAGCCAACATATGTACAATAAATACACTTGCCCAGTTATGAATCATTCATCGAATTCAAGCTTGGTTACTCAGCTTCCTACTATGAGCAAGTCATTGTCCCACCAAATTTCAGCCTCATCTGGCTATTCATTGCCTTTTAATTCATCCATTGGTGCAAATACTTTGGATGCTCAAAAGCTACTGAACAGTGGCAAAGAATATCGTGCCTCCAGATCCACTTTCTTTGGTTCAGAACAGGCAGAGTCTCTATTAGTTAGTTCATCTGGGGTTCCACCACATGCCTCTAGATATAAAACAAAAATCTCTTCTTATGATTGGGAGCCTTCTGTACCTTTTCGACCATCATTTTTTATTACTCCAACCAGTGTATCATCTCCTGGAGATCTGTATGACCCTTTTAATCCTAGTGTTGAGATACCCAATATAGGAGATGGATCCTTGAAAGCTTCCTTTTTTATTCATGGGCCTCCCATCCAGGCTTCATCTCAGGTGCAGACATACGGTGAGCATGCTGTAGCTAGGGACAAGGTGGCAGATCTTAATGATGACAAGAGTTCTGTATCTTCTCATAATAGATTTTATGAGAGTGAGCCAAACAAGAGTTATGTTCCTTGTGAGAAAGATCGTCTTGCACCTGAGAAGGAAACATCAGACCGAACCTATCTAAACTCCCAAAATGGTAAAACAGGCATTGGAGAAAATACCCTTGGTGTTGAAGATATTACGAAAACAGAAAAAGAACGAACTGAGCATGGTGCAAGACATCATGGTGAAGGGTCAGGACATAAAAGGAAAAGAGTCGATAAGGCTAAGAAAAACAATGAAATGAATATTGACTGTCAGATGGATGGCCATGTACAGACTGATTTGAAGGCACTAAAAAATTTTCGTGCAGCTCTTGTAGATTCAGTGAAAGAGTTGTTAAAACCATCTTGGCATGAGGGTCGTCTCAGCAGGGATGCACATAATACTATAGTTAAGAAATCGGTCGACAAGGTTATTAGCACTTTACAGCCCCACCAGATTCCAACCACCATGGATACAGTTAACCACTATGTGTCTTCATCTCGGTTGAAAATCAAGAAGCTTGTTGATGTAAGTGTCCTCTTTTGTTTTTGTAGATAG 2253 0.4106 MNAVKAASGLDFGCLRSDSDLSQPMESEGQQRDLRPVSCGAENPNMVCVEKNDSCKILTTKKEDFYLKHVTSSSPNSRDIVVTAEDDIHHQLNVDNKSNGSSLQSKTFVGCHEPSCDSKAYSCGVKDMDSGTAKLFNDTGKDVAIDFRQRDCFLEDANVTQNPMNQIKQLEVESGDAMNQMTSRFMSPEMRTRSLSPSANMEDGNKRPAIVCNFFAKGWCIRGSSCRFLHIKDCVNNTEQLAEGDLATTNWKREVQLEEGLRDSAEPPKMPDAPVSLAASPVSTSLHSSEVSRKEIIQDEQEASPSRHSSQDKQKFPVLPKEDSSSKNQALPIGRESSKSMDSLFPENRSRFASSNHFSMNLSSYPPRTEGLATIQSQHMYNKYTCPVMNHSSNSSLVTQLPTMSKSLSHQISASSGYSLPFNSSIGANTLDAQKLLNSGKEYRASRSTFFGSEQAESLLVSSSGVPPHASRYKTKISSYDWEPSVPFRPSFFITPTSVSSPGDLYDPFNPSVEIPNIGDGSLKASFFIHGPPIQASSQVQTYGEHAVARDKVADLNDDKSSVSSHNRFYESEPNKSYVPCEKDRLAPEKETSDRTYLNSQNGKTGIGENTLGVEDITKTEKERTEHGARHHGEGSGHKRKRVDKAKKNNEMNIDCQMDGHVQTDLKALKNFRAALVDSVKELLKPSWHEGRLSRDAHNTIVKKSVDKVISTLQPHQIPTTMDTVNHYVSSSRLKIKKLVDVSVLFCFCR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1155 750 MobiDBLite consensus disorder prediction 615 633 - -
Bisa07g1155 750 MobiDBLite consensus disorder prediction 557 645 - -
Bisa07g1155 750 MobiDBLite consensus disorder prediction 321 343 - -
Bisa07g1155 750 MobiDBLite consensus disorder prediction 593 608 - -
Bisa07g1155 750 MobiDBLite consensus disorder prediction 577 592 - -
Bisa07g1155 750 MobiDBLite consensus disorder prediction 292 320 - -
Bisa07g1155 750 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 211 230 IPR000571 GO:0046872
Bisa07g1155 750 ProSiteProfiles Zinc finger C3H1-type profile. 206 233 IPR000571 GO:0046872
Bisa07g1155 750 SMART c3hfinal6 206 232 IPR000571 GO:0046872
Bisa07g1155 750 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 117 742 - -
Bisa07g1155 750 SUPERFAMILY CCCH zinc finger 206 230 IPR036855 GO:0046872
Bisa07g1155 750 MobiDBLite consensus disorder prediction 260 343 - -
Bisa07g1155 750 Gene3D - 198 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1155 Bisa-ChrBisa07 29551738 29554712 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa07g1155 zf-CCCH 8.6e-06 CL0537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1155 07 29551738 29554712 Bisa07g1155 07 29551738 29554712 ECH