Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1152 ATGGCTTCTTCTTCTACTACTACAACTTCTCCTCCTTCTTCCACGTCCCGTGAGGGTCACTACAGAGGGGTGCGAAAGCGACCGTGGGGGCGATACGCCGCTGAGATTCGCGATCCGTGGAAGAAGACGCGGGTCTGGTTGGGGACATTCGACACCCCCGAGGAGGCGGCGCTGGCCTACGATGGCGCCGCCCGTTCGCTCCGCGGGCCCAAGGCCAAGACCAACTTCCCTCCGGCGCCGGTGGCCGCCGGGGGCCTCTGCCTCGACCTCAACGTCCCCACCTCCGATCATCGCTGGTCTCCCATTCCCTCAGGCCGCCTCGTTCTCAACGAGCTCCTCCACGCCGGCGTTCTCAAGGACATTGGCTGTGTCGATCCTCCTCCGCCTTCGCACTCGCATTCACATTCGCCTACTGCGTCCATTGCGATGGCTAACAACCGGCGCGACGGTTCAGCGCCTGTTGGCGGCAGTCAACTTCCGCTGCCGGAGACATCTCCCACGGCGTCGTTTCTTGGTATTGTTCGTCGAGGGCTGCCTATTGACTTGAACGAGCCTCCTCCGTTGTGGCTATGA 573 0.6265 MASSSTTTTSPPSSTSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPPAPVAAGGLCLDLNVPTSDHRWSPIPSGRLVLNELLHAGVLKDIGCVDPPPPSHSHSHSPTASIAMANNRRDGSAPVGGSQLPLPETSPTASFLGIVRRGLPIDLNEPPPLWL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1152 190 SUPERFAMILY DNA-binding domain 20 77 IPR016177 GO:0003677
Bisa07g1152 190 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Bisa07g1152 190 MobiDBLite consensus disorder prediction 146 166 - -
Bisa07g1152 190 MobiDBLite consensus disorder prediction 1 17 - -
Bisa07g1152 190 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Bisa07g1152 190 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Bisa07g1152 190 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Bisa07g1152 190 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Bisa07g1152 190 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Bisa07g1152 190 FunFam Ethylene-responsive transcription factor 2 20 78 - -
Bisa07g1152 190 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 14 130 - -
Bisa07g1152 190 Pfam AP2 domain 20 69 IPR001471 GO:0003700|GO:0006355
Bisa07g1152 190 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1152 Bisa-ChrBisa07 29457049 29457621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1152 13 190 AP2-EREBP Transcription Factor Family AT1G28360 48.731 1.22e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1152 AP2 1.8e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1152 07 29457049 29457621 Bisa07g1152 07 29457049 29457621 ECH