Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1148 ATGGCGCCGAGGGAAAAGACGGCCGCCGTTAAATCTAACGGTCACGGCGGCGTCAAGGAGGTGCATTTCAGGGGAGTCAGAAAGAGGCCGTGGGGTAGATATGCGGCTGAGATTAGAGATCCAGGCAAGAAGAGCCGCGTTTGGCTCGGGACCTTCGATACCGCGGAAGATGCGGCGCGAGCCTACGACGCGGCCGCCCGGGAGTTCCGTGGGGCCAAGGCTAAAACCAATTTTCCCCTCGCTGCCGAGAATGTGAACCGCCAGACCAGTCCGGCTCAGAGCAGTACGGTCGAGTCTTCGAGCCGGGACCGCGAGCCGGCTCACATGGTGGATTCCTCGCCGCTGGACCTTAACTTATCGTCGTCCCGTGCCGGTGGATCCGTTACCAGCTCCGTTCGCTTCCCGTTCCAGCAGCAGTTCCCCCCGATGGCCGCCGCGGTGTTCCCTAGCGCGAATCCAGCGGTGAACCAGGCGTTCTACTTTGACGCTGTGCTGCGCGCGAGCATGGCGGCGGGCCATCCGTTGCAAGGAATCTTGTTCGACCAGCGTCGTTCGGCGGCGGGGGAATTTCGCTCCGGCGGGGTCCAGAGCGAATCCGATTCATCCACCGTGATCGATCTGAACTCCCCCGACGACGAGAAGCCTCCTAAAAGAGAGTTGGATCTCGATCTCAACCTACCTCCTCCGGAGGAAATGGCGTGA 702 0.6168 MAPREKTAAVKSNGHGGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEDAARAYDAAAREFRGAKAKTNFPLAAENVNRQTSPAQSSTVESSSRDREPAHMVDSSPLDLNLSSSRAGGSVTSSVRFPFQQQFPPMAAAVFPSANPAVNQAFYFDAVLRASMAAGHPLQGILFDQRRSAAGEFRSGGVQSESDSSTVIDLNSPDDEKPPKRELDLDLNLPPPEEMA 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1148 233 MobiDBLite consensus disorder prediction 1 20 - -
Bisa07g1148 233 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Bisa07g1148 233 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Bisa07g1148 233 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 13 205 - -
Bisa07g1148 233 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Bisa07g1148 233 MobiDBLite consensus disorder prediction 81 100 - -
Bisa07g1148 233 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Bisa07g1148 233 MobiDBLite consensus disorder prediction 80 122 - -
Bisa07g1148 233 MobiDBLite consensus disorder prediction 188 233 - -
Bisa07g1148 233 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Bisa07g1148 233 MobiDBLite consensus disorder prediction 210 225 - -
Bisa07g1148 233 Gene3D AP2/ERF domain 21 81 IPR036955 GO:0003700|GO:0006355
Bisa07g1148 233 MobiDBLite consensus disorder prediction 192 208 - -
Bisa07g1148 233 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Bisa07g1148 233 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Bisa07g1148 233 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1148 Bisa-ChrBisa07 29400256 29400957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1148 1 229 AP2-EREBP Transcription Factor Family AT5G44210 41.870 1.13e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1148 AP2 1.7e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1148 07 29400256 29400957 Bisa07g1148 07 29400256 29400957 ECH
Bisa12g0550 12 8115493 8116122 Bisa07g1148 07 29400256 29400957 ECH