Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1147 ATGTTCAAGATCAGGCCAAGGAAAAAAGGCCAAGGCCATACACAAGTGTTCTTTATATCTGTGGTATTGGGAGCTTCTCTAGCCGCTGCTCATGCACCAAGTGAAGCTGTAGAAATGAAGAATTCTCCGAGAACCGGCGTACGGCAGTACAACAAGTCGGAGCTTCCTCGCCTCCGGTGGACGCCGGAGCTCCACGAGCACTTCATTGAAGTCGTTGAAAGCCTCGGTGGAAAAGACAAGGCAACCCCAAAGCGTATTTTGCAGATGATGCGTGTGAAAGGATTGAGGATCTCTCACATTAAAAGCCACCTTCAGATGTACAGGAACATGAAGGGACATACCATTCTGGGTCGAGTTGATCAATTGCATAAAGGAAAAGCCCATGTTAATGATCTCCAAATCTGTACTAATTGTTCACCCCAAATTAGATCAGCAGGAAGTATAGGCAAAGTGTCAAAATATAGCAACAGTGCCAAGCGAGAACTGCATCTCTTAGACCACAAATTAGGGCTTTCACAATCCTACAGTGAAGAAACTGATTGTGATCTAAATCAGGAGCCCTATACAAGTACAGGATGCTTGATGAGTGATATGTCAAACGAAGAAGCAAATAGTGAGACAATTCCATTTGGCGATCAGCTGTCCCTCTCTTTTGATCATCACACTCGTCATTTTCCCATGAATTTGATTCATAGTGGCCAACACACAAGAATGCATTCACTCTCTTCTTCACCAAACTCAGCAGATGATGATAATGATAATGATGATGGTGATCAAGTTCTTCATCCCACTAGTTTAACGCAACCTGTTGAGAGGAATTATATAAACCTAGACCTAACAATCTGA 846 0.4326 MFKIRPRKKGQGHTQVFFISVVLGASLAAAHAPSEAVEMKNSPRTGVRQYNKSELPRLRWTPELHEHFIEVVESLGGKDKATPKRILQMMRVKGLRISHIKSHLQMYRNMKGHTILGRVDQLHKGKAHVNDLQICTNCSPQIRSAGSIGKVSKYSNSAKRELHLLDHKLGLSQSYSEETDCDLNQEPYTSTGCLMSDMSNEEANSETIPFGDQLSLSFDHHTRHFPMNLIHSGQHTRMHSLSSSPNSADDDNDNDDGDQVLHPTSLTQPVERNYINLDLTI 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1147 281 Pfam Myb-like DNA-binding domain 58 108 IPR001005 -
Bisa07g1147 281 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 112 IPR017930 -
Bisa07g1147 281 FunFam Two-component response regulator 51 114 - -
Bisa07g1147 281 Gene3D - 55 112 - -
Bisa07g1147 281 MobiDBLite consensus disorder prediction 234 248 - -
Bisa07g1147 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 56 110 IPR006447 GO:0003677
Bisa07g1147 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 40 156 IPR046955 GO:0003700
Bisa07g1147 281 MobiDBLite consensus disorder prediction 234 268 - -
Bisa07g1147 281 SUPERFAMILY Homeodomain-like 56 109 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1147 Bisa-ChrBisa07 29308265 29312833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1147 47 111 G2-like Transcription Factor Family AT2G42660 63.077 4.08e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa07g1147 Myb_DNA-binding 5.4e-08 CL0123