Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1127 ATGGAGTCTGAGGCTGCTTCGGAGGGAGAGAATAATTCCAAGAGGGAAGCCGCTGATGATTACAATGACAATAATACTGGAAGTAACAGCAAAATTGTTAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGCCAGATGAAGACCCCTTTCCAGCTTGAAACCCTGGAGAAAGCTTATGCCTTGGAGACATACCCTTCGGAGGCGATGAGAGCGGAGCTGTCGGAGAAGTTGGGGTTGTCGGATCGCCAATTGCAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGACTTGCCGTCAAAGAAGTCGTCCCGTAAGGCAGTGGCTCCTCCGCCTGATTCTCCGACAGATGAGCTGAGGATGGGGGCTGAACTCGCTAATGATTACGGATCCGGGTCGGGTTCGGGGTCAAGCCCTTTTACGCGGTCGGAGTTGCGTAATGTAGTACCTCGGGGTGTGCCGGGTTACTATGAGTCGCAGCAGTCCATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGGGAGCCTCTGAGGGAGGACGGACCCATTCTAGGAATTGAGTTTGATCCATTGCCACCGGATGCATTTGGAGCACCTATAGCAGTTACAGAGCCGCAGAAGCGGCCTAATCTTGGCTTTGATAGTAAACTCTATGAAAGACACGATGTTAGACCAAATAAGGCTATGGCAAGGGCGTTCCATGAATATCCATTTCTTCCAAACCATTCCAATATTAGATCCGATGCTTATGGACAATTAACCCAATCTCATTTACATGATTCAATGGATGGTCCTACTAGAGCTCCATCTTTTGTGGTAAAAAATGAACAGTTACCCAGGGTTCATTCTGCCCAGGGCCATTCTTCACGTGTTCGTCTTTCATCTCAACAAGAGAAGCAAGGGCTTTCCTACCCATCACCCCCTCGAGATGATGATGGTGCCCCCCAAAGGGAATCTTACACAAACATAAATATTGGAATGAACTCTCACTTCACTGATCACCCTATTGTTGGACCAGAAAACCCTTATGCTCTACCTGGTGTACAAGTTTTCCATGGTGATGCTATAGTGAGGATTGATAGGAAACGAAAGAGCGATGATTCTAGAACAGCAAGGGAAGTTGAAGCCCATGAGATGAGGATCCGAAAAGAGCTTGAGAAACAAGATAACCTTAGGCGAAAGAGCGAAGAAAGAATGAGGAAAGAAATGGAGAGGCAAGATCGTGAAAGAAGGAAGGAAGAAGAGAGGTTGATGCGGGAGAGACAGAGAGAAGAAGAAAGAACAAAACGTGAGCAAAGACGTGAAATGGAACGAAGGGAAAAGTTTCTGATAAAAGAAAATTTAAGAGCTGAGAAAAAGAGGCAAAAAGAAGAGCTCCGCAAAGAGAAAGAAGCTGAGAGAAGGAAAGCTGCCCTTGAGAAGGCAGTTGCTCGAAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTAGAATTGATGGAGTTGGCTGTGGCAAGCAAGGGACTTTCCTCGATTATAAATCTTGATCTCGACACTTTGCAACACCTCGATACATTCCGGGATTCATTGTGTGTTTTTCCACCCAAGAGTGTAAAGCTGAAGAAACCATTTGCTATTCAACCATGGACAAAATCAGAGGAGAATGTTGGCAACCTTCTCATGGCCTGGAGATTTTTGATTACTTTTGCGGATGTGCTCGAGTTATGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTGTTGGGCGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAGGACATCGAAGATGTTGCAAGGACACCTATGGGATTAGGTATGAACCAGAATGGTGCTGCTAATCCTGGGGGTGGCCATCCGCAGATTGTGGAAGGGGCATATGCATGGGGCTTTGACATACGAAATTGGCAAAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCTGGATTTGGACCACAGCTGAAGAAAAGGAGTATCACTTGGTCATATGCAAATGATAAAGATGAGCTTGGTAGAAGTTGTGAAGACATCATTTCCACACTTCGCAATGGTTCAGCAGCTGAAAATGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCCCCTCGGAGATCTAGGCACCGTTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTCTGTCTCTTGAGGGTAGCAAGGGGTTAACGGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGTGACCTGACGACCAGCAAGACGCCTGAGGCATCAATTTCTGTTGCTTTAACCAGAGATGCTAAGCTTTTTGAAAGAATAGCACCCTCAACATATCGAGTACGAGCTGCATATAGAAAGGATCCTGCTGATGCTGAGGCCATTCTGTCTGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTGGCTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCAGAAAGTGATGAAGTTGATGAGGATCCTGAAGTCGACGATTTAGTAAATCCTTCAAGTGATAACAAAACCTCTGAACAGTATGATGACATGAACAATTGCTCAATAAATGGAAAAGAAAATTTGAGCCATGACATAGAACTTATTCAAAATGAGTTTGACAAGGATCTGCCATGTGTACCGGAGAATGGTTCCAAGCATGCTGATTGTCCAAGTATTGTCACTGGACAACCTGTTGCTGTCGAAGACCTGAATCCTGGAAATCTTGATGAAGATAATATGGAAATTGATGAAAGCAAGGCTGGAGAGTCATGGGTTCAAGGTCTTACAGAAGGAGAATATTCTGATCTCAGCGTAGAGGAACGTCTCAATGCTCTTGTTGCATTGGTTGGTGTGGCAAATGAAGGAAACTCTATACGTGTTGTTCTTGAGGACCGTTTGGAAGCAGCAAATGCTTTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGTCAGAAAGATGATAATTTTAATAAACCAGATTTCCCTTCTCTTACGGTGAATAAAGCTGATACACAATATACTGGTCCTGCTGCAGATGGAAATCAGAGCCCATTGCTTGACATAAATGTTAATAATAATGAGGCATCACCCAGCACTGCAGAAAACCAAAGAGAAGTTCTTGGTGCACAGAGCATGCCTATTGAAAAGCCCTCAGTTGTTCAAGATCTTTTCATAGGTTCAGATAACCCTCAAACTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCTTATATTGCCCATATAGCAGAAGAGATGTATGTTTATAGGTCCTTGCCGCTTGGTCAAGATCGGAGACGTAACCGATATTGGCAATTTGTTGCATCTGCTTCCAGCAGTGATCCTGGTTCTGGCAGGGTCTTTGTTGAATTACATGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCCTTTGATGCACTTTTGACGTCACTTGATTCACGTGGGATCAGGGAATCCCATCTGCGCTTAATGTTGCAGAAGATTGAGAATTCCTTTAGGGAAACTGTTCGAAAGAATGCACAATTTAATAAAAGTGCAACCAGAGGGAAACATTCAATTAAAAATGAAGCTGATGAAGTAGATTTCATCACTGATCGCCGTGCTGGATCAGACAGTTCTAGTAGTTCTCTATGTGGTTTGAATTCTGATAATACACTGGAAACTTCATCATCCTTCAAAATTGAGCTTGGAAAAAGTGAGAGTGAAAAGAAGGCTGCCTTGAGAAAGTACCAAGATGTTCAAAAGTGGATGTGGAAAGAGTGCTATAATTTATCAACATTATATGCAATGAAATATGGGAAAAAGAGATGCAAACCACTGGTGGAGTTATGTGATATGTGTTTGAATCCATACTTCTTTGAAGACTTTCATTGTAATTCTTGCCACCGTACTTTTGGCGCTAGTAATGGATTGAATTTTTCTAAACATGCATATCAATGCAAAGAGAAGCTAGACTCCAAAGATATTTGTATTTGGGATTCTTCTCTTCCCTTGCGAACAAGATTACTCAAGGCCCTGTTTGCTTATATTGAGGCATCTGTTCCTCTTGAAGCATTACGATCAACTTGGACAGAAGAGAATAGGAAGCAATGGGGTGTGAAGTTGAGCAAATCAACTACAGTTGATGAAATTTTACAGCTATTGACCTTGTTAGAGAGAGCATTACAGCGAGACTTTCTGTCATCAAACTTTTCTACAACAGAGGAAATGTTGGGATCAAGCAGTATGCCCGAGAGTGCTGTAAATGCTTTGGCTGATACTGATTCAGTTCCTGTGCTTCCATGGTTACCACAAACCACTGCAGCTGTCTCTCTCAGACTTTTTGAGTTTGATGCATCCATCAGTTACATACAACTTGAGAAACCTGACCCTCGTGAGGAGAAAGAAATGGGGGAATATATAAAGCTTCCTTCAAGATATGCTCCTTTCAGGCCTGCTAGAGCTATTGATTCAGCAGAATTAGATCCTGATGAATTCATTAAAGAAGACAAATCTGCTCATAATAAAAGTGTTCGAGGCAGCAACAAACGAGGACGAGGATCTCATGATCAAGGACGGGGTAAAAAGTTGTCCAGAAGAACACATGAACCAAAACAAAATCCTGGGCGTCGAAATGTTAAGGGTAATGAGAATTTGGGTCAAGGATTGAAACAGCAGGGACGAGGGACACAAGGACAGCATGGTGGACGTGGTCGTCGAACGGTGAGGAAGAGGAGAGTGGAAAAGAGGGCTGTTGAGGATCTGTTGCTGGGCCACGCAGGTGCCAGTCATAGTTCCAAGGTTGGTAGAGGATCATTGAATTTGGAAGAGGAATGGGATGGTGAAAAGGAGGCAAGTCCCATCCACATGGAGGGTGCTGATCATAGTAACAGTGCCGAGGAAGTGGAATCTGATGACAATGGACAAGCAGTGGAATATGAACAAGGAAACTGGGAGATAGGCTTTAATGGCGGTAGCGCCAACAGATGGGGCAGGGATTTAGTTGGAGTTAGTGATGAGGAAATGGTGGGTGCTTCTGAAGATGAAAATGGCATTGAAGAGGGAGAGGAGGAGTTGGACGATTCAGAGGAAGATGTTATGAGTGAAGGTGAGGGTGAGGGTTCAGATGGAATGGCAAATAGAATGATAGTAAATGAAGAAGGCTCGGATTCAGCTGTCTCTGAAGATTCTTCCGATTAG 5274 0.4346 MESEAASEGENNSKREAADDYNDNNTGSNSKIVNSNEGQSKPKRQMKTPFQLETLEKAYALETYPSEAMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKSSRKAVAPPPDSPTDELRMGAELANDYGSGSGSGSSPFTRSELRNVVPRGVPGYYESQQSIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPIAVTEPQKRPNLGFDSKLYERHDVRPNKAMARAFHEYPFLPNHSNIRSDAYGQLTQSHLHDSMDGPTRAPSFVVKNEQLPRVHSAQGHSSRVRLSSQQEKQGLSYPSPPRDDDGAPQRESYTNINIGMNSHFTDHPIVGPENPYALPGVQVFHGDAIVRIDRKRKSDDSRTAREVEAHEMRIRKELEKQDNLRRKSEERMRKEMERQDRERRKEEERLMRERQREEERTKREQRREMERREKFLIKENLRAEKKRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLSSIINLDLDTLQHLDTFRDSLCVFPPKSVKLKKPFAIQPWTKSEENVGNLLMAWRFLITFADVLELWPFTLDEFLQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPMGLGMNQNGAANPGGGHPQIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPQLKKRSITWSYANDKDELGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRSRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFLAVEDADDVEREEESESDEVDEDPEVDDLVNPSSDNKTSEQYDDMNNCSINGKENLSHDIELIQNEFDKDLPCVPENGSKHADCPSIVTGQPVAVEDLNPGNLDEDNMEIDESKAGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRVVLEDRLEAANALKKQMWAEAQIDKVRQKDDNFNKPDFPSLTVNKADTQYTGPAADGNQSPLLDINVNNNEASPSTAENQREVLGAQSMPIEKPSVVQDLFIGSDNPQTLSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGSGRVFVELHDGNWRLIDSEEAFDALLTSLDSRGIRESHLRLMLQKIENSFRETVRKNAQFNKSATRGKHSIKNEADEVDFITDRRAGSDSSSSSLCGLNSDNTLETSSSFKIELGKSESEKKAALRKYQDVQKWMWKECYNLSTLYAMKYGKKRCKPLVELCDMCLNPYFFEDFHCNSCHRTFGASNGLNFSKHAYQCKEKLDSKDICIWDSSLPLRTRLLKALFAYIEASVPLEALRSTWTEENRKQWGVKLSKSTTVDEILQLLTLLERALQRDFLSSNFSTTEEMLGSSSMPESAVNALADTDSVPVLPWLPQTTAAVSLRLFEFDASISYIQLEKPDPREEKEMGEYIKLPSRYAPFRPARAIDSAELDPDEFIKEDKSAHNKSVRGSNKRGRGSHDQGRGKKLSRRTHEPKQNPGRRNVKGNENLGQGLKQQGRGTQGQHGGRGRRTVRKRRVEKRAVEDLLLGHAGASHSSKVGRGSLNLEEEWDGEKEASPIHMEGADHSNSAEEVESDDNGQAVEYEQGNWEIGFNGGSANRWGRDLVGVSDEEMVGASEDENGIEEGEEELDDSEEDVMSEGEGEGSDGMANRMIVNEEGSDSAVSEDSSD 1757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1127 1757 ProSiteProfiles DDT domain profile. 553 612 IPR018501 -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 98 120 - -
Bisa07g1127 1757 Pfam HB1, ASXL, restriction endonuclease HTH domain 735 803 IPR007759 GO:0006355
Bisa07g1127 1757 SUPERFAMILY Homeodomain-like 27 97 IPR009057 -
Bisa07g1127 1757 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1121 1193 IPR028941 -
Bisa07g1127 1757 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 1629 1660 - -
Bisa07g1127 1757 Coils Coil 1703 1723 - -
Bisa07g1127 1757 Gene3D - 25 99 - -
Bisa07g1127 1757 CDD homeodomain 43 97 IPR001356 GO:0003677
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 389 439 - -
Bisa07g1127 1757 SMART testlast3 553 612 IPR018501 -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 1524 1757 - -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 1569 1590 - -
Bisa07g1127 1757 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 26 1757 IPR044977 GO:0006357
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 836 859 - -
Bisa07g1127 1757 SMART HOX_1 40 102 IPR001356 GO:0003677
Bisa07g1127 1757 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 284 324 - -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 1 51 - -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 834 874 - -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 7 21 - -
Bisa07g1127 1757 Coils Coil 378 480 - -
Bisa07g1127 1757 Pfam DDT domain 554 609 IPR018501 -
Bisa07g1127 1757 ProSiteProfiles HARE-type HTH domain profile. 735 804 IPR007759 GO:0006355
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 285 307 - -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 1524 1568 - -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 1700 1729 - -
Bisa07g1127 1757 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 945 988 IPR028942 -
Bisa07g1127 1757 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1127 Bisa-ChrBisa07 29003369 29012832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1127 4 1681 Homeobox Transcription Factor Family AT1G28420 50.432 0.0 1375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa07g1127 WSD 1.6e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1127 07 29003369 29012832 Bisa07g1127 07 29003369 29012832 CCT
Bisa07g1127 07 29003369 29012832 Bisa07g1127 07 29003369 29012832 ECH