Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1123 ATGCGACACCTTCTCCTTCTTCTCCTCTGCTTTGTCTTCCTACCTCTCACTGTTCTCTCTCTGAACCAGGATGGTCTCTACCTCTACCAATTCAAGCTCTCCGTGGACGACCCCGACTCCTCCCTCTCCTCCTGGAACGACCGGGACGCCCACCCCTGCTCCTGGTCCGGCGTCACCTGCGACTCCACTAACACCTCTGTCACCGAACTCCACCTCTCCAACTCCAACATCGCCGGCCCATTCCCCGCTTCCATTCTCTGCCGCCTCTCCAACCTCACCTCCCTCGCCCTTTTCAACAACTCCATCAACGACACCCTCCCTTTGGAAATCTCCAACTGTACCAGCCTCGTTCACGTTGACCTCTCCCAGAACCTTCTCACCGGTGCTCTGCCTCACTCCTTGTCGGAGCTTCCCAACCTGCGGTACCTGGACTTGACCGGCAACAATTTCTCCGGCCCCATACCCGAGTCCTATGGTCGGTTTCATAAGCTCGAGGTTATCTCTCTTGTCTACAACCTTCTAGACGGAACAATACCCGCTTCTCTCGGAAACATTACCACTCTGAAGATGCTCAACCTCTCTTACAACCCGTTCTTCCCGGGTCAGATCCCTCCGGAGCTTGGGAATCTAACGAATCTCGAGGTCATGTGGCTCACACAATGTAACTTGGTGGGCGTCATTCCTGACTCGTTCGGAAAGTTGAAGAAACTCATGGATTTGGACCTGGCTTTGAACAATCTCTACGGTTCGATTCCCAGTTCCCTCGTTGAGATGAGGAGCCTGAAGCAGATTGAGCTATATAACAACTCGTTATCCGGTGAGTTGCCTCGGGGAATGGGAAACCTCACTGCATTGAGGCTACTCGACGTGTCGATGAACCGTTTGACTGGGAAGATTCCGGACGAGTTGTGTCAACTGCCACTCGAGAGCCTTAACCTTTACCAGAATCAGTTTGAGGGTGGGCTGCCGGAGAGCATTGCCAACTCGCCGAATCTCTATGAAATTAGGTTGTTTGGCAACAAACTGACCGGGAAACTTCCAAGTAATCTCGGGAAGAATGCTCCTATAAGGTGGCTTGACGTTTCGAGCAACCAGTTCTGGGGCGAAATCCCGGCGACTCTATGTGATAATGGGAAATTGGAAGAGCTTCTGATGATATACAACTCGTTTTCCGGTGAGATCCCGGCGAGTTTGGGCAGTTGTCGGAGTTTGATGCGAGTCCGGCTTGGGTTCAACAAGTTGTCCGGCGAAGTACCGGCATCTATTTGGGGGCTTCCACACGTGTATCTCCTTGAGCTCATTGATAACTCGTTTTCTGGTTCAATCGCGAAGACTATCGCTGGCGCGGCGAACTTGTCCTTGTTGACTCTATCGAAGAACAATTTCACAGGGCCGATCCCTGATGAGGTTGGATGGCTGGAAAATCTTGAGGCGTTCTCGGGTAACGATAACATGTTTAATGGGTCGCTGCCTGCTAGCATAGTGAATCTTGGGCAGCTTGGGAGTCTTGATCTTCACAACAATAAACTCTCTGGTGAGCTTCCGAAGGGAATTCGATCCTGGAAGAAGCTCAACGAGTTGAATCTGGCAAATAATGAGATTGGTGGTACTATTCCTGAAGAAATTGGGAGTTTGTCCGTGCTAAATTATCTTGATCTTTCGAATAATCAGTTTTCCGGGGTAGTTCCTCTTGGGTTGCAGAATTTGAAGCTCAATAGGTTTAATATGTCTTACAATCAACTCTCTGGAGAACTTCCTCCTATGTTGGCTAAGGATATGTACAGGACTAGTTTTCTGGGTAACCCTGGTTTATGTGGGGATTGGAAAGGCTTATGTAATGGCAGAGATGAAGCTAAGGCTACGGGTTATTCTTGGTTGCTCCGAACTATTTTCATTGTTGCCACTGTAGTGTTTGTCGTGGGTGTGGTCTGGTTCTATTTCAAATATAAGAGCTTTAAAACGGCAAAAAGAGCCATTGACAAATCAAAATGGACATTGATGTCATTCCATAAACTGGGTTTCAGTGAAGATGAGATTTTGAACTGCCTTGATGATGATAGCGTGATAGGAAGTGGATCATCAGGGAAAGTTTACAAGGTCGTTCTTAGCAACGGGGAAGTTGTTGCTGTCAAGAAGTTAAGGGGAGGCATCAAACAGGATGTAGAGAGTGGGAATGTTGAAAAAGGTGAGTTTCATGAAAATGTTTTTGATGCAGAAGTTGAAACTTTGGGCAAAATTAGGCACAAAAACATCGTCAAGCTTTGGTGTTGCTGCACCACCAGGGACTGCAAGCTCTTGGTTTACGAGTACATGCCTAATGGCAGTCTTGGTGATTTGCTTCATAGCAGTAAAGGAGGGTTATTGGACTGGCCAACGAGGTATAAGATAGCCGTTGATGCTGCAGAAGGCCTCTCTTATCTGCATCATGACTGTGTTCCCCCAATCGTCCACAGAGATGTGAAATCCAACAATATTCTCTTAGATGGCAACTTTGGAGCAAGGGTGGCCGATTTTGGAGTAGCTAAGGTTGTTGAAACCACTGCGGAAGGAACCAAATCCATGTCTGTCATTGCTGGCTCTTGTGGATACATTGCACCAGAATATGCATACACGCTGAGGGTGAATGAGAAGAGCGACATATACAGCTTTGGTGTTGTAATACTTGAGTTGGTGACAGGAAGACGGCCAATGGACCCAGAGTTTGGAGAAAAGCACTTGGTGAAGTGGGTTTGCACCACCTTGGACCAGAAAGGCGTGGACCATGTTCTTGACTCTAGGCTGGACCCTTGCTACAAAGAAGAGGTTTGCAAGGTCCTTAACATTGGCCTCATGTGCACCAGTCCTTTGCCTATCAACCGCCCCTCTATGAGGAGAGTCGTCAAGATGCTGCAAGAGATGGGCACAGAGAACCAAACCAACCCTATCAAGAAAGATGGAAAATTGTCTCCTTATTACTGTGATGACGCCTCAGATCCTGGAAGTGTAGCTTAG 2991 0.4821 MRHLLLLLLCFVFLPLTVLSLNQDGLYLYQFKLSVDDPDSSLSSWNDRDAHPCSWSGVTCDSTNTSVTELHLSNSNIAGPFPASILCRLSNLTSLALFNNSINDTLPLEISNCTSLVHVDLSQNLLTGALPHSLSELPNLRYLDLTGNNFSGPIPESYGRFHKLEVISLVYNLLDGTIPASLGNITTLKMLNLSYNPFFPGQIPPELGNLTNLEVMWLTQCNLVGVIPDSFGKLKKLMDLDLALNNLYGSIPSSLVEMRSLKQIELYNNSLSGELPRGMGNLTALRLLDVSMNRLTGKIPDELCQLPLESLNLYQNQFEGGLPESIANSPNLYEIRLFGNKLTGKLPSNLGKNAPIRWLDVSSNQFWGEIPATLCDNGKLEELLMIYNSFSGEIPASLGSCRSLMRVRLGFNKLSGEVPASIWGLPHVYLLELIDNSFSGSIAKTIAGAANLSLLTLSKNNFTGPIPDEVGWLENLEAFSGNDNMFNGSLPASIVNLGQLGSLDLHNNKLSGELPKGIRSWKKLNELNLANNEIGGTIPEEIGSLSVLNYLDLSNNQFSGVVPLGLQNLKLNRFNMSYNQLSGELPPMLAKDMYRTSFLGNPGLCGDWKGLCNGRDEAKATGYSWLLRTIFIVATVVFVVGVVWFYFKYKSFKTAKRAIDKSKWTLMSFHKLGFSEDEILNCLDDDSVIGSGSSGKVYKVVLSNGEVVAVKKLRGGIKQDVESGNVEKGEFHENVFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGNFGARVADFGVAKVVETTAEGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPMDPEFGEKHLVKWVCTTLDQKGVDHVLDSRLDPCYKEEVCKVLNIGLMCTSPLPINRPSMRRVVKMLQEMGTENQTNPIKKDGKLSPYYCDDASDPGSVA 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1123 996 Pfam Leucine rich repeat 90 150 IPR001611 GO:0005515
Bisa07g1123 996 Pfam Leucine rich repeat 212 271 IPR001611 GO:0005515
Bisa07g1123 996 SMART LRR_typ_2 234 258 IPR003591 -
Bisa07g1123 996 SMART LRR_typ_2 210 233 IPR003591 -
Bisa07g1123 996 SMART LRR_typ_2 137 161 IPR003591 -
Bisa07g1123 996 SMART LRR_typ_2 89 113 IPR003591 -
Bisa07g1123 996 SMART LRR_typ_2 497 521 IPR003591 -
Bisa07g1123 996 SMART LRR_typ_2 545 568 IPR003591 -
Bisa07g1123 996 SMART LRR_typ_2 282 306 IPR003591 -
Bisa07g1123 996 SMART serkin_6 683 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1123 996 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 21 185 - -
Bisa07g1123 996 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Bisa07g1123 996 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 771 980 - -
Bisa07g1123 996 FunFam Leucine-rich receptor-like protein kinase family protein 203 301 - -
Bisa07g1123 996 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
Bisa07g1123 996 Gene3D Ribonuclease Inhibitor 199 308 IPR032675 -
Bisa07g1123 996 Pfam Protein kinase domain 686 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1123 996 MobiDBLite consensus disorder prediction 968 996 - -
Bisa07g1123 996 Gene3D Phosphorylase Kinase; domain 1 649 770 - -
Bisa07g1123 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Bisa07g1123 996 SUPERFAMILY Protein kinase-like (PK-like) 678 964 IPR011009 -
Bisa07g1123 996 SUPERFAMILY RNI-like 352 586 - -
Bisa07g1123 996 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 230 965 - -
Bisa07g1123 996 SUPERFAMILY RNI-like 69 415 - -
Bisa07g1123 996 FunFam Receptor-like protein kinase HSL1 307 614 - -
Bisa07g1123 996 FunFam Receptor-like protein kinase HSL1 667 770 - -
Bisa07g1123 996 Gene3D Transferase(Phosphotransferase) domain 1 771 986 - -
Bisa07g1123 996 Gene3D Ribonuclease Inhibitor 20 198 IPR032675 -
Bisa07g1123 996 ProSiteProfiles Protein kinase domain profile. 683 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1123 996 Gene3D Ribonuclease Inhibitor 309 614 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1123 Bisa-ChrBisa07 28926977 28930258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1123 17 996 Receptor kinase-like Gene Family AT1G28440 69.706 0.0 1414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa07g1123 Pkinase 5.6e-42 CL0016