Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1115 ATGATGGGTTTGATCGATCTTAACACTACGGAGGACGACGAAACGCCGTCGTCGGGTTCCTCTGCTTCTCTGTCCTCTCACTCGGGTGTGAGCACTTCGGCTTCTACTCTGGGCCCTTCTTCCTCCGTGTGCTTGGAGCTATGGCACGCGTGTGCCGGTCCGATGATCTCTTTGCCGAAGAAAGGAAGCGTTGTCGTTTACTTCCCACAGGGCCACTTCGAGCAGCAACTTCAGGATTTTCCGGTCGCCGCCTGTAATATCCCACCCCATGTGTTCTGTCGCGTGGTAGATGTCAAGCTCCATGCTGAGGAAGGTATCGATGAGGTGTATTGTCAGGTATCGCTGGTTCCTGAAAGTGAGCAAGTTGAGAGAAAATTGCGGGAAGGTGAAGTTGATGCTGATGGTGAAGATGACGAGGAAACTGAAGCTGCAGTGAAGTTAACAACTCCTCATATGTTCTGCAAGACTCTGACTGCTTCTGATACTAGCACTCATGGTGGGTTCTCCGTGCCTCGTCGTGCAGCCGAAGATTGCTTTCCTCCTCTGGATTATAATCAACAACGACCTTCGCAAGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAATGGAAGTTCCGGCATATTTACAGAGGGCAGCCACGGAGGCATTTGCTTACAACCGGATGGAGTGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGCTGTTTCTTAGGGGCGAGGATGGAGTACTGAGATTAGGAATTCGTAGAGCATCTCAGTTGAAAAGCGGTGGTACCTTTTCAGTTCCCTCAGGCCTGCCACTGAATCCTAGCACCGTCATGGATGTTGTTAATGCCATATCTACAAGATGTGCCTTTAGTGTTTGCTATAACCCTAGGGTTAGCTCGTCAGAGTTCATATTACCCCTCCACAAGTTCCTGAAGAGCCTTGATCAATTTTATTCAGTTGGGATGAGGTTCAGGATGCGCTTTGAAACTGAAGATGCTGCAGAGCAAAGATGCACAGGATTAGTTATTGGAATTAGCGATGTGGATCCTGTTCGATGGCCTGGATCAAAATGGAGATGCCTTATGGTAAGGTGGGATGACATGGAAGCCAATAGGCATAATAGGGTTTCCCCGTGGGAAATCGAGCCATCTGGTTCTGTTTCACCTTCCAGTAACTTTAATGCAGCTGGTTTGAAGAGGAACAGGATCAGTTTGCCTTCTTCAAAGCTCGAATTTCCAGTTCCCCATGGGATTGGAACATCAGACTTTGGGGAGCCATTAAGGTTCCGGAAGGTCTTGCAAGGTCAAGAAATTTTAGGTGTCAATACGCCTTTCAATGGTATGAGTGCTCAAAGTCACCCCTTAACCGAAATGAGGCGGTGCTATCCTGGTTCAAGCTGTTCTGGGATTGTTGCAACAGGAAACAGAATCAGAATCCCACAAGTGAATTCTGATGTTTCCCGCAACAGCATAGGCTTTAGTGAATCTTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATACGGAGGAGCCTTATCTGTTAACGAGGCTCATGGAAATGGTCGCTATGGAATTTTTGATGGTTGTCATTCGCTGAGCTCCCGAAACATGTGGTCTGCTCAGATGCAGGATAGGTCTGCACATCTGCATCATCCTGTTCCATCTAGGCAAGTTTCATCCCCATCATCCGTGTTAATGTTCCAGCATGCTGTCAATCCAGTTTCAAATTGTGATTACAACAGCGTTAAGAATCACGGGACGGATGGTAAAATCGAATATCGAGGACTACATCTGGCTTCTGAAATCAAAGGTGGAAAATTTGCATCATCATCCTATGAGCCTAGTTTCTGTGGGCAAGCTCAGGGAGGAACAAACCCTTTTGGTATGTCAGAGCATAGTCAAATGGACACTTCACTTTCCCATCATTCTGTATCACCAGTGAGAGGAAGTCAAGAGCTGGTTTCCTCATGTAAAAGTAGCTGCAGACTTTTCGGTTTCTCGTTGACTCAAGAAAATCACATTGCAAGTGAAGAAGCTAACTCCGAACTTCCTGGTGATCTGAATTCTGGCTCTCCTTTCACTCGACGTGTTGGAGATGAGTTCCACACAGGGCACTCACTGAGGAGCAAGGTGGTTGGGGGCAACTGTACCAAAGTAAGCTAA 2178 0.4734 MMGLIDLNTTEDDETPSSGSSASLSSHSGVSTSASTLGPSSSVCLELWHACAGPMISLPKKGSVVVYFPQGHFEQQLQDFPVAACNIPPHVFCRVVDVKLHAEEGIDEVYCQVSLVPESEQVERKLREGEVDADGEDDEETEAAVKLTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGIRRASQLKSGGTFSVPSGLPLNPSTVMDVVNAISTRCAFSVCYNPRVSSSEFILPLHKFLKSLDQFYSVGMRFRMRFETEDAAEQRCTGLVIGISDVDPVRWPGSKWRCLMVRWDDMEANRHNRVSPWEIEPSGSVSPSSNFNAAGLKRNRISLPSSKLEFPVPHGIGTSDFGEPLRFRKVLQGQEILGVNTPFNGMSAQSHPLTEMRRCYPGSSCSGIVATGNRIRIPQVNSDVSRNSIGFSESFRFQKVLQGQEILPSQPYGGALSVNEAHGNGRYGIFDGCHSLSSRNMWSAQMQDRSAHLHHPVPSRQVSSPSSVLMFQHAVNPVSNCDYNSVKNHGTDGKIEYRGLHLASEIKGGKFASSSYEPSFCGQAQGGTNPFGMSEHSQMDTSLSHHSVSPVRGSQELVSSCKSSCRLFGFSLTQENHIASEEANSELPGDLNSGSPFTRRVGDEFHTGHSLRSKVVGGNCTKVS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1115 725 CDD B3_DNA 151 253 IPR003340 GO:0003677
Bisa07g1115 725 ProSiteProfiles B3 DNA-binding domain profile. 153 255 IPR003340 GO:0003677
Bisa07g1115 725 Pfam Auxin response factor 280 360 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bisa07g1115 725 Pfam B3 DNA binding domain 153 254 IPR003340 GO:0003677
Bisa07g1115 725 SMART B3_2 153 255 IPR003340 GO:0003677
Bisa07g1115 725 Gene3D - 151 255 IPR015300 -
Bisa07g1115 725 MobiDBLite consensus disorder prediction 10 31 - -
Bisa07g1115 725 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 42 683 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bisa07g1115 725 MobiDBLite consensus disorder prediction 1 31 - -
Bisa07g1115 725 FunFam Auxin response factor 151 255 - -
Bisa07g1115 725 SUPERFAMILY DNA-binding pseudobarrel domain 149 260 IPR015300 -
Bisa07g1115 725 MobiDBLite consensus disorder prediction 627 649 - -
Bisa07g1115 725 FunFam Auxin response factor 316 387 - -
Bisa07g1115 725 Gene3D - 316 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1115 Bisa-ChrBisa07 28725393 28730021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1115 38 507 B3 DNA Binding Superfamily AT5G60450 49.898 1.32e-143 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bisa07g1115 B3 7.7e-22 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1115 07 28725393 28730021 Bisa07g1115 07 28725393 28730021 ECH