Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1093 ATGAATTTAGCCTCCCAAACAGACCTCCCACTTAACGAGAACGACTCACAAGACATGGTCATCTACCAAGTCCTCCACGAGGCCAATTCTCTCCACAACACCACCGCCTCTGCCTCCTCCTCCGCCGCCGCCGCCGCCGCAGCATTGAATCAGAAGAGGCACCAAACCGCAGCGCAGGGCGGCCTGGAGCCGACCAAGACGGTCGTAAAGAAGCACTACAGGGGAGTGAGGCGGCGGCCGTGGGGGAAATACGCGGCGGAGATCCGCGATTCCGCCCGCCAAGGAGCGCGCGTGTGGCTCGGGACGTTCGAAACGGCGGAGGAGGCGGCGATGGCTTACGATCGAGCCGCTTTCAGAATGAGAGGCGCCAAGGCTCTGCTCAATTTCCCAGCCGACATCGTAGCTTCTTCCATGGAGTTATCTTCTGATTCTAATTCTAATCCTGTTTTGAGGTCAGGCAGATTGTACAATCAGGATTCGGATTCAAGTGCTACCACAAGTTCAATTGGGACCAGTACAACTTTGTTGGAAAGCACAGGTAGCACCGATAGTTAG 555 0.5622 MNLASQTDLPLNENDSQDMVIYQVLHEANSLHNTTASASSSAAAAAAALNQKRHQTAAQGGLEPTKTVVKKHYRGVRRRPWGKYAAEIRDSARQGARVWLGTFETAEEAAMAYDRAAFRMRGAKALLNFPADIVASSMELSSDSNSNPVLRSGRLYNQDSDSSATTSSIGTSTTLLESTGSTDS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1093 184 MobiDBLite consensus disorder prediction 47 62 - -
Bisa07g1093 184 Pfam AP2 domain 72 122 IPR001471 GO:0003700|GO:0006355
Bisa07g1093 184 PANTHER DNA-BINDING DOMAIN 19 160 IPR044808 GO:0003700|GO:0009873
Bisa07g1093 184 MobiDBLite consensus disorder prediction 47 66 - -
Bisa07g1093 184 SUPERFAMILY DNA-binding domain 72 132 IPR016177 GO:0003677
Bisa07g1093 184 Gene3D AP2/ERF domain 71 132 IPR036955 GO:0003700|GO:0006355
Bisa07g1093 184 CDD AP2 71 132 IPR001471 GO:0003700|GO:0006355
Bisa07g1093 184 PRINTS Ethylene responsive element binding protein signature 96 112 IPR001471 GO:0003700|GO:0006355
Bisa07g1093 184 PRINTS Ethylene responsive element binding protein signature 73 84 IPR001471 GO:0003700|GO:0006355
Bisa07g1093 184 MobiDBLite consensus disorder prediction 140 184 - -
Bisa07g1093 184 SMART rav1_2 72 136 IPR001471 GO:0003700|GO:0006355
Bisa07g1093 184 ProSiteProfiles AP2/ERF domain profile. 72 130 IPR001471 GO:0003700|GO:0006355
Bisa07g1093 184 FunFam Ethylene-responsive transcription factor 2 71 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1093 Bisa-ChrBisa07 28228688 28229242 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1093 9 133 AP2-EREBP Transcription Factor Family AT5G47220 53.846 2.45e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1093 AP2 2e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1093 07 28228688 28229242 Bisa07g1093 07 28228688 28229242 ECH