Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1091 ATGTCCAATATGAGCCTAAAGATGAAATTCAAATTCCAATATGGCGCTTGGATGGCAGTGTTTTTTGAGGAAAGTGAACATGGGACAGCAGGTGCAGGGATGATGGCGATGGTGTGGGTGACGAAGAGTGTGAGAACTGAGAGGAAGGGACGACGTGGTGGGCAACTGAGGATGGTGACGGAGATTGAGGGGAAAGCAAGGGACAACGACTGTGTTCAGAGATGCTTCTGCATCACTGTTCCTCAGAATGTTTATAGGAATTCAATGTTTAACATGGCTTCTGAAGGCATTCTTGAGAATGTATGGGCTAAGATCATAAGCAGTAATGAATCACAATGGGAAGAACTGCCTAATCTGCATGGAAGAGAAGGGTCTATGGAAGTTCTGAAGAGGCTTCCAAGCTTAGGAAGATGGATATCAATGGGGGCAGAGTTCTGGGAAGAAATCTTACATGGATTTCCACCTTCTTCTCCCAATTTAGAAGGAGCTCACAGTGACTTTTTTGAATCCAATAAGAAGGTAGAAGAAGAAGAAGAAGCAGAAGCTGTGAAAGTGAAAACAGAAAAGAAAGTGGCTCCAAAGCACTACAGGGGAGTGAGGAGGAGGCCATGGGGAAAATATGCAGCAGAAATCAGAGATTCATCAAGAAAATGTGCAAGAGTTTGGCTTGGGACATTTGACACAGCAGAAGAAGCAGCTTTGGCTTATGACAAGGCTGCTCTCAGAATTAGGGGTCCTAAGGCATACCTTAATTTCCCACTAGAGACAGTTTCAAAAGCCTTAGGATTTGACACCATAACTTGTCATGAGAAGTACTGTAATTCTCGTAAGAGAGGGTCAAGGGAGGGAGAAGTTGTTACTGATATGATGAATGAAGAACCTGCAAGGAAAAAAATGGCAGGCTTGGGAGGGACGGTGAGGAATGAAGAAGATGATGTTATTGAGTTTCAGGACTTGGGGAGTGATTATTTGGAGAGTTTGTTATCTTCTTTCTGA 996 0.4367 MSNMSLKMKFKFQYGAWMAVFFEESEHGTAGAGMMAMVWVTKSVRTERKGRRGGQLRMVTEIEGKARDNDCVQRCFCITVPQNVYRNSMFNMASEGILENVWAKIISSNESQWEELPNLHGREGSMEVLKRLPSLGRWISMGAEFWEEILHGFPPSSPNLEGAHSDFFESNKKVEEEEEAEAVKVKTEKKVAPKHYRGVRRRPWGKYAAEIRDSSRKCARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLETVSKALGFDTITCHEKYCNSRKRGSREGEVVTDMMNEEPARKKMAGLGGTVRNEEDDVIEFQDLGSDYLESLLSSF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1091 331 PRINTS Ethylene responsive element binding protein signature 219 235 IPR001471 GO:0003700|GO:0006355
Bisa07g1091 331 PRINTS Ethylene responsive element binding protein signature 196 207 IPR001471 GO:0003700|GO:0006355
Bisa07g1091 331 PANTHER DNA-BINDING DOMAIN 176 325 IPR044808 GO:0003700|GO:0009873
Bisa07g1091 331 FunFam Ethylene-responsive transcription factor 2 194 255 - -
Bisa07g1091 331 SMART rav1_2 195 259 IPR001471 GO:0003700|GO:0006355
Bisa07g1091 331 Pfam AP2 domain 195 245 IPR001471 GO:0003700|GO:0006355
Bisa07g1091 331 Gene3D AP2/ERF domain 194 255 IPR036955 GO:0003700|GO:0006355
Bisa07g1091 331 ProSiteProfiles AP2/ERF domain profile. 195 253 IPR001471 GO:0003700|GO:0006355
Bisa07g1091 331 SUPERFAMILY DNA-binding domain 195 255 IPR016177 GO:0003677
Bisa07g1091 331 CDD AP2 194 253 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1091 Bisa-ChrBisa07 28202811 28205219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1091 97 331 AP2-EREBP Transcription Factor Family AT4G18450 38.188 1.24e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa07g1091 AP2 1.9e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g1091 07 28202811 28205219 Bisa07g1091 07 28202811 28205219 ECH