Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1085 ATGGATTTTACAGATCGCGATGAAGTTACACTGGGCATAGGCCTCAAGGTCATGCTCCCTGCAGCTTTCTGCTTATTCGCTATTGTCTTTTTCATCATCGTCTTCCACTTGTGCGCAAGACGCCGCCGAAATCGTCAACAGAGAAGACGCCTAGATGACGATCAAGTAGTTTACCAGATCAGATCTCAGATTGCGCCGCTTGATGTGGAGCCACGTTCACAGGGTCTAGATCCTTCGGTCATAGCCTCGCTCCCGAAGCTCTCATACAAGCAATCGGAGCAGTTCAGGGAGAGCGAAAATACAGAGTGCTCTGTTTGCCTAGCCACTATTGTGGAAGATACGACGGTTAGGATTTTGCCCAATTGTAAGCACTTGTTTCATGTTGATTGTGTTGATAAGTGGTTCGGTTCCAACACCACTTGCCCGATTTGCCGCACCGTGGCTAAACCGATGGTGCGGTCGGGGCACGGTGAGGTTCAGCCCACGGCACCACCGGTTGAGGAAAATGGTGAACTGACGGGTCTCCCACCATAG 534 0.5094 MDFTDRDEVTLGIGLKVMLPAAFCLFAIVFFIIVFHLCARRRRNRQQRRRLDDDQVVYQIRSQIAPLDVEPRSQGLDPSVIASLPKLSYKQSEQFRESENTECSVCLATIVEDTTVRILPNCKHLFHVDCVDKWFGSNTTCPICRTVAKPMVRSGHGEVQPTAPPVEENGELTGLPP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1085 177 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 17 147 IPR044675 -
Bisa07g1085 177 SUPERFAMILY RING/U-box 88 150 - -
Bisa07g1085 177 FunFam E3 ubiquitin-protein ligase ATL6 66 150 - -
Bisa07g1085 177 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Bisa07g1085 177 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 150 IPR013083 -
Bisa07g1085 177 MobiDBLite consensus disorder prediction 154 177 - -
Bisa07g1085 177 SMART ring_2 103 144 IPR001841 -
Bisa07g1085 177 Pfam Ring finger domain 102 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1085 Bisa-ChrBisa07 28029608 28030141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1085 10 153 C3H Transcription Factor Family AT2G42360 39.726 3.10e-27 100