Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1050 ATGGTTTACTGCTCTTATAACTCGAATTCTTCATCTGGATCTGATACTTCGAGGCTGTTCAACCCAACTTCACAAAAAATTGGTGATTCTAATGGGGTTTCGCAGAGTGGGTTGGTGTCACCGCATTCTTTTGTTCTGAATAGTGAGAAAGGGGAGCTAGTGAAGTCCCCTAAGAAGATGGGAAAGAAAGGGGTGTCAGAGGCAAAAGTTTTAGCGGCTTTGAAGAGCCACAGCGAAGCAGAGAGAAGGAGAAGGGAGAGAATAAATGGTCATCTCGCTACACTTCGTGGTCTTGTGCCCTGCAATGAAAAGATGGACAAAGCAACGTTATTGGCTGAAGTTATCAGCCAAGTGAAGGAACTGAAGAAAAATGCAGTGGAAGCAAGTAGAGGGTTCCTCATTCCAACGGATGATGATGAAGTGAAAGTTGAACCATACAATGATGAAGGAGGAGAAGCATCGATATCTTGCAGTTACAGGGCATCTGTGTGCTGTGATTACCGATCGGAGCTTCTATCTGACCTGAGGCAGGCTCTTGACAGCCTTCAAATACAATTGATGAGGGCAGAAATATCAACTTTGGGAGGCAGGGTGAAGAATGTATTTGTCTTTACATGCAGCAAAAAAGAACATATTAATATTGAGTCATGCCAACTTCTTCCAAGTACTGTCCACCAGGCACTAAGTTCTGTTCTGGAGAAGGCTTCTAGCTCTCTGGAATACTCACTAGGAATGTCACTTCGAAGCAAGCGTCGAAGACTTTGCTTCATTGACACGTCTACTTCCTCATGA 792 0.4407 MVYCSYNSNSSSGSDTSRLFNPTSQKIGDSNGVSQSGLVSPHSFVLNSEKGELVKSPKKMGKKGVSEAKVLAALKSHSEAERRRRERINGHLATLRGLVPCNEKMDKATLLAEVISQVKELKKNAVEASRGFLIPTDDDEVKVEPYNDEGGEASISCSYRASVCCDYRSELLSDLRQALDSLQIQLMRAEISTLGGRVKNVFVFTCSKKEHINIESCQLLPSTVHQALSSVLEKASSSLEYSLGMSLRSKRRRLCFIDTSTSS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1050 263 Pfam Helix-loop-helix DNA-binding domain 76 121 IPR011598 GO:0046983
Bisa07g1050 263 Coils Coil 172 192 - -
Bisa07g1050 263 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 121 IPR011598 GO:0046983
Bisa07g1050 263 MobiDBLite consensus disorder prediction 1 33 - -
Bisa07g1050 263 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 123 IPR036638 GO:0046983
Bisa07g1050 263 SMART finulus 78 127 IPR011598 GO:0046983
Bisa07g1050 263 CDD ACT_UUR-ACR-like 162 205 - -
Bisa07g1050 263 PANTHER TRANSCRIPTION FACTOR BHLH30 29 259 IPR045847 GO:0003700|GO:0006355
Bisa07g1050 263 Gene3D - 72 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1050 Bisa-ChrBisa07 26510681 26513500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1050 65 239 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 44.633 3.54e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g1050 HLH 3.7e-10 No_clan