Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1011 ATGGCCGACGTCGTGTCCTCCGGGGCCACCCCCAGCAGCGGCAAAAACAAGAAGCCCAACGGGAACAATCTCTTGTTGGGTCGCTTCGAAATCGGTAAGCTCCTCGGTCATGGAACTTTCGCAAAGGTCTACCATGCCCGGAACATCAGAACCGGCGAAGGGGTCGCCATCAAGGTCATAGACAAGGAGAAGATCCTCAAGAGTGGGCTAGCCGCTCACATCAAGCGGGAGATCTCCATCCTCCGACGCGTGCGACACCCCAACATCGTCCAGCTCTTCGAGGTAATGGCGACGAAGGCCAAGATCTATTTCGTGATGGAATACGTTCGTGGGGGTGAGCTATTCAGTAAGGTTGCGAGAGGGCGATTGAAAGAGGAAGTCGCGAGGAAATACTTTCAGCAATTGATCTCCGCCGTCGGGTTCTGCCACGCGAGAGGGGTGTACCACAGGGATCTCAAGCCTGAAAACTTGCTACTCGACGAGGATGGTAATCTCAAGGTGTCTGATTTTGGGTTGAGTGCTGTATCTGATCAGATTAGGCAGGACGGGTTGTTCCACACGTTTTGTGGGACGCCTGCTTATGTGGCTCCTGAGGTATTGGCTCGGAAAGGGTACGATGGGGCAAAGGTGGATCTTTGGTCTTGTGGGGTTGTTTTGTTTGTTCTGATGGCAGGGTACTTGCCTTTCCATGACCAGAATATTATGGCAATGTATAAGAAGATTTACAGAGGTGAGTTCAAATGCCCCAAGTGGTTTCCACCTGAGCTCTCTCGGCTTGTCACGCGGCTTCTTGATACCAACCCGCAAACCCGGATTTCGGTTCCGGAGATTATGGAGAACAGGTGGTTTAAGAAAGGGTTCAAGCAGATAAAGTTCTATCTGGAGGATGATAGAGTTTGTAATGTTGATGATAAGCTGCTGGCTGGGAAAGATGATGATTTGGAATCAATTTCGGACTTCTTTACATCAGAATCTGACACGGAGGTAGAGATCAGGAGAAGGAATGCTAATGCCTCGTTGCCAAGACCTGCGAGCTTGAACGCATTTGACATCATATCATTTTCTCCAGGCTTCGATCTTTCTGGGTTGTTTGAGGAGAAAGGGGATGAGGCGAGGATTGTGTCTGGTGCACCAGTGTCTAAGATTATATCAAAATTGGAGGAAATTGCCAGACTAGTGAGCTTCACTGTGAGGAAGAAGGATTGCAGGGTTAGCTTGGAGGGTTCAAGAGAGGGCGTGAAGGGACCACTCACGATTGCTGCAGAGATTTTTGAACTGACACCTTCTCTGGTGGTGGTGGAGGTGAAGAAAAAAGGAGGGGATAAAGCCGAGTATGAGCAGTTTTGTAACACTGAATTGAAACCTGGGTTGGAGAATTTGATGAGAGAGGAATCTGCTGCTACTTCCAACATACCTACAGCTACTGAACCGATTCAAATTCCATTGGATGATGAAATTCCGCAGCGCATTCCTTCTGATACTGAATAG 1488 0.4906 MADVVSSGATPSSGKNKKPNGNNLLLGRFEIGKLLGHGTFAKVYHARNIRTGEGVAIKVIDKEKILKSGLAAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFSKVARGRLKEEVARKYFQQLISAVGFCHARGVYHRDLKPENLLLDEDGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDLWSCGVVLFVLMAGYLPFHDQNIMAMYKKIYRGEFKCPKWFPPELSRLVTRLLDTNPQTRISVPEIMENRWFKKGFKQIKFYLEDDRVCNVDDKLLAGKDDDLESISDFFTSESDTEVEIRRRNANASLPRPASLNAFDIISFSPGFDLSGLFEEKGDEARIVSGAPVSKIISKLEEIARLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKAEYEQFCNTELKPGLENLMREESAATSNIPTATEPIQIPLDDEIPQRIPSDTE 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1011 495 MobiDBLite consensus disorder prediction 1 20 - -
Bisa07g1011 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Bisa07g1011 495 ProSiteProfiles NAF domain profile. 341 365 IPR018451 GO:0007165
Bisa07g1011 495 FunFam Non-specific serine/threonine protein kinase 343 461 - -
Bisa07g1011 495 Pfam NAF domain 343 399 IPR004041 GO:0007165
Bisa07g1011 495 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1011 495 SUPERFAMILY Protein kinase-like (PK-like) 25 284 IPR011009 -
Bisa07g1011 495 MobiDBLite consensus disorder prediction 464 495 - -
Bisa07g1011 495 MobiDBLite consensus disorder prediction 1 21 - -
Bisa07g1011 495 Gene3D Kinase associated domain 1, KA1 343 462 - -
Bisa07g1011 495 CDD STKc_SnRK3 28 282 - -
Bisa07g1011 495 FunFam Non-specific serine/threonine protein kinase 18 328 - -
Bisa07g1011 495 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Bisa07g1011 495 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1011 495 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 21 455 - -
Bisa07g1011 495 FunFam Non-specific serine/threonine protein kinase 20 108 - -
Bisa07g1011 495 Gene3D Transferase(Phosphotransferase) domain 1 20 339 - -
Bisa07g1011 495 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1011 495 CDD CIPK_C 347 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1011 Bisa-ChrBisa07 25392662 25394149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1011 24 495 CBL-interacting serine-threonine protein kinases AT4G18700 77.895 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bisa07g1011 Pkinase 2e-73 CL0016