Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1009 ATGTATCGATCGGGTCCTCCCCTCACAGCCATTGACAGGTTCTTATGGGGCCAGCAGCCACAGATCAACCAGTTAGCTTCTCTTGCTACTCCACCAAATTACAATGTTAATTTGTGGCCTAACACTCATGAAGCATCAAGTTTTATCGATGGGTTATCGATGGGAAATGTCGAGGAGGCTTTGAGTCGGACCCACACCCATATTCCTGCACCGTGCCTGAAACCAGACATGCAAGTTTTAGGGAAGAAGATTGTTAATGCTAAAGTGGTGGGGATGGGGAGGAGAACTAAGAAAGGGTCTTCTGTGTCTTTGATCAAAGGACAGTGGACTGATGAAGAAGACAGGAAACTGGTGAGGCTGGTGAAGCAATATGGAGTAAGAAAATGGGCTGAAATAGCTGAGGAGCTGGAAGGAAGAGCAGGGAAGCAGTGTCGAGAGAGATGGCACAATCATCTGCGTCCTGATATTAAGAAACATAGTTGGAGTGAAGAAGAAGAAAGGATATTGGTAGAAACACATGCCAAGGTGGGAAATCGCTGGGCAGAGATAGCAAGGAGCATACCAGGAAGAACAGAGAATGCAATAAAGAACCACTGGAATGCCACTAAAAGGAGGCAGAATTCAAAGAGAAAGAAGAAAAACTCGCACTACACCTCAAATAAAAAGCCGCAGTCCTCAGTACTTGAAGACTATATCAGAAGCAAGACCCTTAATAACTCCTCCACCATCAACCCTACCCAGAGCACCACCTCCGAGGGCCCAGAAAACCAATCTGAGTCTGTTAATGACAAGGAATCCCCACCGTTAATAGCTGAACCCTATGATGATGAATTCCTCTATTTGCAACATTTATTAACTGAGGATCAAATTCAGAAACAGCTAGAGCCTCTTGAACACTCTCAGCATTCTCACACTTCCTACTTGTTGGATTTTTGTCAAACTGGTGGTGATCGGCTACGTCTTTCTGATGTGACTAATGAATCTGGATTATTTGTGTATTCCAATCCAAACCCCCCGTATAACAGAATGAACTTGGATGTGGAAGCTACCTCTCCCATTAAACACCCTCAATCTGATCGCTATCTCTCTTACCTGCTGAATGGAACACCCAGTTCATCAATTTGGTCTGTTTATGGAAATCAAAACCTGAAGATGGATTTGCATGTAGGGTATGGAGATAGTTCAGAAGGAAAGAGAGAGATGGATTTGATGGAATTTGTTTCTTCTTCTCAGTTGTGTTGGAGCACCAACAGAGGCATTCTTTAA 1266 0.4392 MYRSGPPLTAIDRFLWGQQPQINQLASLATPPNYNVNLWPNTHEASSFIDGLSMGNVEEALSRTHTHIPAPCLKPDMQVLGKKIVNAKVVGMGRRTKKGSSVSLIKGQWTDEEDRKLVRLVKQYGVRKWAEIAEELEGRAGKQCRERWHNHLRPDIKKHSWSEEEERILVETHAKVGNRWAEIARSIPGRTENAIKNHWNATKRRQNSKRKKKNSHYTSNKKPQSSVLEDYIRSKTLNNSSTINPTQSTTSEGPENQSESVNDKESPPLIAEPYDDEFLYLQHLLTEDQIQKQLEPLEHSQHSHTSYLLDFCQTGGDRLRLSDVTNESGLFVYSNPNPPYNRMNLDVEATSPIKHPQSDRYLSYLLNGTPSSSIWSVYGNQNLKMDLHVGYGDSSEGKREMDLMEFVSSSQLCWSTNRGIL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1009 421 ProSiteProfiles Myb-like domain profile. 101 152 IPR001005 -
Bisa07g1009 421 MobiDBLite consensus disorder prediction 202 218 - -
Bisa07g1009 421 ProSiteProfiles Myb-like domain profile. 153 203 IPR001005 -
Bisa07g1009 421 FunFam Transcriptional activator Myb isoform A 105 158 - -
Bisa07g1009 421 SMART sant 157 205 IPR001005 -
Bisa07g1009 421 SMART sant 105 154 IPR001005 -
Bisa07g1009 421 SUPERFAMILY Homeodomain-like 103 199 IPR009057 -
Bisa07g1009 421 Gene3D - 105 157 - -
Bisa07g1009 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 156 IPR017930 -
Bisa07g1009 421 Gene3D - 159 230 - -
Bisa07g1009 421 MobiDBLite consensus disorder prediction 219 264 - -
Bisa07g1009 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 207 IPR017930 -
Bisa07g1009 421 CDD SANT 160 203 IPR001005 -
Bisa07g1009 421 Pfam Myb-like DNA-binding domain 109 166 - -
Bisa07g1009 421 MobiDBLite consensus disorder prediction 191 269 - -
Bisa07g1009 421 CDD SANT 109 152 IPR001005 -
Bisa07g1009 421 PANTHER MYB PROTEIN-RELATED 106 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1009 Bisa-ChrBisa07 25378522 25380542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1009 1 414 MYB Transcription Factor Family AT5G58850 39.316 2.87e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g1009 Myb_DNA-bind_6 1.3e-19 CL0123