Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g1007 ATGATCCCATTTATTTGTAGATTCTGGATTCTTCTGGCGCTGTTTGCTCTCGTGGAATCTTCATGCAACAGTACAGACCAGGAGCTGGTCTTAAACGCCTTCCGATTAGTCGCTGGGTTCGATATTTCTTGGTACCAAACACAAGGTTCAAACTGTTCAAAAGCTTCTCAAGTTAGCAGAATAGTGCTTTCGTCCAGGAATCTAAGTGGGGCTATCTCATGGGCGTATCTCAAAAACATGTCCAGGTTACAGGTTCTTGATCTCTCCGGGAATTCTCTGCAAGGCCAAGTGCCAACCTGGTTCTGGGCAGGTCGAAGCTTATTGGAAGTCGATCTTTCCAGCAACAAGTTTGGAGGGAGCATTGGGTTCCCACGCACCTCAGCTAACAACTCGTTTTCATCGCTTCAAAAGCTCAATCTCTCTCATAATAGGTTCACCAATTTGGTTCACCTCTCTGGGTTTTCAAACCTCAAAATTCTTGACCTCTCGCATAACGATTTGACGACTCTCCCCTCTGGCTTCCAAAACCTCACCAAGCTGCACCACCTTGACCTTTCGAGCTGCAATATCAAATCAAACGTAAAACCTATCTCTGTTCTCCCCTCACTGAACTACTTGGACTTATCAAACAACGCTTTCAATGGTACTTTCCCTTCCGATTTCCCACCTCTCAAAAGCCTCAATTTCTTCAACATTTCTCGTAACAACTTCACAACAGTGGTTCCCTTAGATAGGTACGGGAAATTTGGGAAATCAGCTTTCATTGACGCTGGTAACAACTTCATTTACAATACATCCAAAACACCTCGTCCTATAAAAACCCCAAAATCCAAATCCAAACCCAAAACTCTGGTTTTAACGGTGTCCTCTGCCTCAGCATTTATAGTGGTTCTATTGTGTGTCTGGGTGTTTTGCATTTACAGAAAGAAGCGGCGATTGGCGAAGAAGAACAAATGGGCAATCTCGAAGCCGGTCCCGACGGCCATCAAGGTGGAGAAATCTGGGCCGTTCGAATTCGAGACAGAGTCAGGCAGCTCGTGGGTGGCGGACCTGAAGGAGCCGTCGTCCGCGGCCGTGGTGATGTTCGAGAAGCCGTTGATGAACCTCAGCTTCAAGGACCTTATCGCTGCCACGTCACATTTCGGCAAGGAGTCCCTGCTGGCGGAGGGCAGGTGTGGGCCGGTCTACAGAGCCGTCATCCCTGGCGACATCCACGTAGCAATCAAGGTCCTCGAAAATGCAAGAGACGTTGATGAGGATGACGCCATTTCCTTGTTCGTTGACATGTCGAAGCTCAAACATCCCAATTTATTGCCACCCTCCGGTTACTGCATCGCAGGTAAGGAGAAGCTGATTTTGTACGAGTTCATGTCAAATGGCGATTTGGGACGGTGGCTACATGAGCTGCCAACGGGGGAGACGAACGTGGAGGATTGGACAGGTGACACGTGGGAAATTCAGAACGGAGTCGGATCGCAAGCCTCTTCCCAGGAGAAGATGGGTTGGCTAACACGACACCGGATTTCCCTGGGGATAGCCCGGGGACTAGCGTATCTCCACCACGCAGGGTCAAAGTCCGTCGTCCACGGCCACGTGGTGACGTCAAATATCTTACTTGCCGACAACTTCGAGCCCCGAATCGCTGATTTCGGGTTTCGAAACATTGGTCAGGGTCAAAACCCGAATTGCACCACCGTGACGGACGTCTACTGCTTCGGGGTGGTATTAATGGAACTGTTGACGGGAAAACCCGGCACGGCGGAGACGGTGGTTTGGGTGCGGAAGCTGGTGAGAGAGGGGCACGGGTTTCGTGCCTTGGACGAGAGCCTGAAACTCGGTTGCGACTCGGAAAGCGAGATGGTGGAGAGCCTCCGAGTCGCGTATCTCTGTACGGCCGAGTCGCCGGGGAAAAGGCCCACGATGCAGCAGGTCCTGGGTTTGCTCAAAGACATTCATACACACGACGGACTCGAATCGAGTTAA 1983 0.5053 MIPFICRFWILLALFALVESSCNSTDQELVLNAFRLVAGFDISWYQTQGSNCSKASQVSRIVLSSRNLSGAISWAYLKNMSRLQVLDLSGNSLQGQVPTWFWAGRSLLEVDLSSNKFGGSIGFPRTSANNSFSSLQKLNLSHNRFTNLVHLSGFSNLKILDLSHNDLTTLPSGFQNLTKLHHLDLSSCNIKSNVKPISVLPSLNYLDLSNNAFNGTFPSDFPPLKSLNFFNISRNNFTTVVPLDRYGKFGKSAFIDAGNNFIYNTSKTPRPIKTPKSKSKPKTLVLTVSSASAFIVVLLCVWVFCIYRKKRRLAKKNKWAISKPVPTAIKVEKSGPFEFETESGSSWVADLKEPSSAAVVMFEKPLMNLSFKDLIAATSHFGKESLLAEGRCGPVYRAVIPGDIHVAIKVLENARDVDEDDAISLFVDMSKLKHPNLLPPSGYCIAGKEKLILYEFMSNGDLGRWLHELPTGETNVEDWTGDTWEIQNGVGSQASSQEKMGWLTRHRISLGIARGLAYLHHAGSKSVVHGHVVTSNILLADNFEPRIADFGFRNIGQGQNPNCTTVTDVYCFGVVLMELLTGKPGTAETVVWVRKLVREGHGFRALDESLKLGCDSESEMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHTHDGLESS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g1007 660 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 50 652 - -
Bisa07g1007 660 SMART LRR_typ_2 80 103 IPR003591 -
Bisa07g1007 660 SMART LRR_typ_2 132 153 IPR003591 -
Bisa07g1007 660 SMART LRR_typ_2 154 176 IPR003591 -
Bisa07g1007 660 SMART LRR_typ_2 200 223 IPR003591 -
Bisa07g1007 660 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Bisa07g1007 660 Pfam Protein tyrosine and serine/threonine kinase 385 553 IPR001245 GO:0004672|GO:0006468
Bisa07g1007 660 FunFam Calmodulin-binding receptor kinase CaMRLK 133 243 - -
Bisa07g1007 660 Gene3D Phosphorylase Kinase; domain 1 341 456 - -
Bisa07g1007 660 Gene3D Transferase(Phosphotransferase) domain 1 457 658 - -
Bisa07g1007 660 PRINTS Leucine-rich repeat signature 200 213 - -
Bisa07g1007 660 PRINTS Leucine-rich repeat signature 157 170 - -
Bisa07g1007 660 Gene3D Ribonuclease Inhibitor 151 286 IPR032675 -
Bisa07g1007 660 Gene3D Ribonuclease Inhibitor 19 150 IPR032675 -
Bisa07g1007 660 FunFam Putative LRR receptor-like serine/threonine-protein kinase 342 456 - -
Bisa07g1007 660 SUPERFAMILY L domain-like 44 242 - -
Bisa07g1007 660 ProSiteProfiles Protein kinase domain profile. 381 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g1007 660 SUPERFAMILY Protein kinase-like (PK-like) 371 651 IPR011009 -
Bisa07g1007 660 Pfam Leucine rich repeat 59 117 IPR001611 GO:0005515
Bisa07g1007 660 Pfam Leucine rich repeat 134 190 IPR001611 GO:0005515
Bisa07g1007 660 ProSiteProfiles Leucine-rich repeat profile. 134 155 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g1007 Bisa-ChrBisa07 25363703 25365990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g1007 40 651 Receptor kinase-like Gene Family AT5G07280 29.635 1.02e-73 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Bisa07g1007 PK_Tyr_Ser-Thr 2.7e-20 CL0016