Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0996 ATGATACCTTTTGAATCCCTCTTGGTGGATCTGTATTTCCCCGGGCCAATAGCCTCTGCCTTCCCTTCCTTTCCTGTTTCTTGTATACGTCCTTTTCATTATGGTCGGTTGGCCCTGAAAGGGTCAAATAGCTTGTGTCTGGGGAAAACTAAACCCTTAGCTGGAAGGAGGGTCCCAGATGTAATGGGTCTTAATGGTGCCAATGTTAATATATGGCCGACTTGTAATGATGCAAACATGTTCCTTGTGAAGTGTAATGAAATGGATCCTAAAGTGTTTTTACACAATACAGATGGAGAGAAAGAGGGCAAAGCGACTGGAAGCTCAGCAGTGAAGATCCAAGTAAAAAGTTTCAGCCTTTTTGGTTCTGTACTTGTTCTGATCTCTTGTTTCATGGAAGATGTGAAACGAGTTGTTTGGCTCATCTTCTTTCTGTGGAGCTGGTTGCCAATGGCTGGTGGCACTAACAGTCTTCTTTCTCCAAAGGGTGTGAACTACGAAGTGGCTGCTTTGATGGCGATGAAGATTAAAATGAAAGACGAGTTGCGTGTTATGGATGGTTGGGATATTAATTCGGTGGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAGGGCTATGTGATTTCCTTGGACATGGCTAGTATGGGTTTATCTGGAACGCTTTCCCCAGGAATTGGAAATTTGAGTCACCTCCGAACATTGTTATTGCAGAACAATCAGTTGTCCGGTCCCATCCCCGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAACCAGTTCACCGGTGAAATTCCTGCTTCTCTGGGCTCTTTGACTCGTCTAAGTTACTTGCGGCTCAGTAGAAATAACCTATCTGGACAGATTCCTCGGCCCATTGCAAATCTCACAGGCCTCTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTCCCACTCCAAACATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTCTGCGTATCTTCATCAGCACAGACTTGTGTGGGTGTTTCAAAACCATTAAATGAATCAGGTTCATCTGTGGAAGTTGGTAGTCATCGCCATTGGGTACTTTCTGTTGCGGTTGGCATTAGTTGCACGTTTATAGTTTCAGTAGTGCTGCTTATCTATTGGGTGCATTGGTACAGATCACGCATACTCTATTCATCTTATGTGGAGCAAGATTATGAATTTGATATTGGTCATTTGAGGAGGTTTACCTTCCGTGAATTGCAATCTGCTACTAGTAACTTCAGTCCAAAAAATATCCTAGGACAAGGTGGATTTGGTGTTGTCTACAAAGGATGTCTTCCAAATAAAATGATGGTCGCAGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTGCAGTTTCAAACTGAAGTTGAGATGATTGGTTTGGCAGTGCATCGGAATCTCTTGCGTCTCTACGGCTTTTGTATGACATCCGATGAGAGGTTACTTGTTTACCCTTACATGCCTAATGGTAGTGTTGCCGATCGCTTGAGAGACACTTGCCGCGAAAGGCCATCATTGGATTGGAACAGGCGAATGCTTATTGCTGTTGGGGCTGCTCGTGGGCTTCTCTACTTACATGAACAATGCAACCCGAAAATTATCCACAGGGATGTTAAGGCCGCAAATATTTTGCTAGATGGAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCCAAGCTCTTGGATCAAAGAGATTCACATGTCACCACTGCAGTGCGAGGGACTGTAGGGCACATTGCCCCAGAGTATCTCTCCACCGGACAGTCTTCTGAAAAAACGGATGTTTTTGGATTCGGCATACTTCTTTTGGAGCTCATTACAGGGCAAAAGGCGTTGGATGCTGGAAACGGTCAGGTCCAGAAGGGAATGATTCTTGATTGGGTTAAAACCTTATTTGAGGAGAAACGGCTGGAAGTGCTGGTAGACAGGGATCTGAGGGGACGGTTTGACCCTATGGAGCTAGAGAAAGCAGTGGAGTTGTCTCTACAGTGCACTCAATCGCATCCCACCCTCCGCCCAAAGATGTCGGAAGTCTTGAAGATCCTGGAAGGGCTCGTCGGGCAGGGGCAGCCGGAGGAGCCTCGAGGCGGAGGTAACCTTTATGACGAAAGGGCTTGTAGTTTCTCCAGAAATTATAGCGACGTCCATGAAGAACCTTCCTTTATTATTGAAGCCATTGAGCTTTCTGGACCTCGCTGA 2253 0.4545 MIPFESLLVDLYFPGPIASAFPSFPVSCIRPFHYGRLALKGSNSLCLGKTKPLAGRRVPDVMGLNGANVNIWPTCNDANMFLVKCNEMDPKVFLHNTDGEKEGKATGSSAVKIQVKSFSLFGSVLVLISCFMEDVKRVVWLIFFLWSWLPMAGGTNSLLSPKGVNYEVAALMAMKIKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMGLSGTLSPGIGNLSHLRTLLLQNNQLSGPIPAEIGKLLELQTLDLSGNQFTGEIPASLGSLTRLSYLRLSRNNLSGQIPRPIANLTGLSFLDLSFNNLSGPTPNILAKGYSISGNNFLCVSSSAQTCVGVSKPLNESGSSVEVGSHRHWVLSVAVGISCTFIVSVVLLIYWVHWYRSRILYSSYVEQDYEFDIGHLRRFTFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMMVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSDERLLVYPYMPNGSVADRLRDTCRERPSLDWNRRMLIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDGSFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQVQKGMILDWVKTLFEEKRLEVLVDRDLRGRFDPMELEKAVELSLQCTQSHPTLRPKMSEVLKILEGLVGQGQPEEPRGGGNLYDERACSFSRNYSDVHEEPSFIIEAIELSGPR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0996 750 FunFam Somatic embryogenesis receptor kinase 1 398 503 - -
Bisa07g0996 750 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Bisa07g0996 750 ProSitePatterns Protein kinases ATP-binding region signature. 434 456 IPR017441 GO:0005524
Bisa07g0996 750 ProSiteProfiles Protein kinase domain profile. 428 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0996 750 Pfam Protein kinase domain 431 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0996 750 Pfam Leucine rich repeat N-terminal domain 165 204 IPR013210 -
Bisa07g0996 750 SMART serkin_6 428 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa07g0996 750 Gene3D Ribonuclease Inhibitor 164 346 IPR032675 -
Bisa07g0996 750 FunFam Putative LRR receptor-like serine/threonine-protein kinase 164 346 - -
Bisa07g0996 750 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515
Bisa07g0996 750 SMART LRR_typ_2 254 278 IPR003591 -
Bisa07g0996 750 SMART LRR_typ_2 302 325 IPR003591 -
Bisa07g0996 750 SMART LRR_typ_2 230 253 IPR003591 -
Bisa07g0996 750 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 140 699 - -
Bisa07g0996 750 FunFam Somatic embryogenesis receptor-like kinase 1 504 711 - -
Bisa07g0996 750 SUPERFAMILY Protein kinase-like (PK-like) 412 701 IPR011009 -
Bisa07g0996 750 Gene3D Phosphorylase Kinase; domain 1 398 503 - -
Bisa07g0996 750 SUPERFAMILY L domain-like 170 337 - -
Bisa07g0996 750 Gene3D Transferase(Phosphotransferase) domain 1 504 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0996 Bisa-ChrBisa07 25122750 25128387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0996 172 750 Receptor kinase-like Gene Family AT5G45780 73.103 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa07g0996 Pkinase 3.1e-43 CL0016