Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0994 ATGGATCAGGCAAGAAAGCAAGAAAGTGATGAGGTATTGGATCTTGTTGATGAAGTAATAGGTAAGAAATTGAGCCATTCGGTTGAAGGGGGTGCAAAAGATGCAGTAGCTGGGGGCAGCTTGGGTGATGGAGCTTCTGCAAGTGGAGGTGGGACTTTAGAAAAGATGAGTAATGATCCGGAATTGAAGAAGGAACTAAAGGAGGGTCCTCCAGAAGCTGTGGATCAGGACATGCGTGATCAGCAAAATACAAGTGACGCATTCTGCGGAGTCGATCAGGGAACAGGTTATAATTCAAGAAATTTGGTTAGTGGGGCAGTGCCTGAGACCGTGGTTGTGATAGATTCTGCTGAGACAGAGGCTGTGAATGGAGATAATAGGAAGTTGGATGCCAAGGTGAATGAATCAGGGTTGAGCAAGGCATCGATGAAAGTTCCAAAAGGGGCTTCTGAAGCAGATAACAAATCATGCGTCATTGATATAAAGGGTGGTAGCTGCAAAGATTTTAGCGGGAATTTGGAGGGCGAAAGGATTTGTAGGATTTGCCATCTGGCTTCTGGGCAAACATCAGATGCAACACCTGCTAGTACTACTAGTGGAGATTTAATTCAGCTTGGTTGTGCATGTAAAGATGAGCTAGGAATTGCACACAGTCATTGTGCTGAGGCATGGTTCAAGCTAAAAGGAAACAGACTATGTGAAGTATGTGGTGAGACAGCAAAAAATGTTTCCGGTGTGACTGATAACGGATTTATAGAAGAGTGGAATGAAAGAACATTCATTGACAGCCACAGTACCTCATCAGCCATGTGTGGTGGATGCTGGCGGGGACAGCCATTCTGTAACTTCTTGATGGCATGCCTTGTAATAGCTTTTGTTCTCCCGTGGTTTTTCCGTGTGAATATGTTCTGA 912 0.4474 MDQARKQESDEVLDLVDEVIGKKLSHSVEGGAKDAVAGGSLGDGASASGGGTLEKMSNDPELKKELKEGPPEAVDQDMRDQQNTSDAFCGVDQGTGYNSRNLVSGAVPETVVVIDSAETEAVNGDNRKLDAKVNESGLSKASMKVPKGASEADNKSCVIDIKGGSCKDFSGNLEGERICRICHLASGQTSDATPASTTSGDLIQLGCACKDELGIAHSHCAEAWFKLKGNRLCEVCGETAKNVSGVTDNGFIEEWNERTFIDSHSTSSAMCGGCWRGQPFCNFLMACLVIAFVLPWFFRVNMF 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0994 303 ProSiteProfiles Zinc finger RING-CH-type profile. 171 243 IPR011016 GO:0008270
Bisa07g0994 303 SUPERFAMILY RING/U-box 176 239 - -
Bisa07g0994 303 PANTHER ZINC FINGER, RING-CH-TYPE 68 303 - -
Bisa07g0994 303 Pfam RING-variant domain 179 236 IPR011016 GO:0008270
Bisa07g0994 303 MobiDBLite consensus disorder prediction 24 78 - -
Bisa07g0994 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 241 IPR013083 -
Bisa07g0994 303 MobiDBLite consensus disorder prediction 57 75 - -
Bisa07g0994 303 SMART ringv_2 178 237 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0994 Bisa-ChrBisa07 25114871 25117785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0994 159 302 C3H Transcription Factor Family AT5G05830 41.611 2.70e-30 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0994 07 25114871 25117785 Bisa07g0994 07 25114871 25117785 ECH