Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0963 ATGGACACCAGCAATTTAATGGCACTGTGTCCTGTGTTCATAGGGTGGGGTGTGTCTCTGAGTCCGCCTACAACGGATCTCAGCGCTCATAGGGTCTTCTTGGTCACTCCTCATTCTACTCGCTGCTACACTCTCTTTCTCTCTCTTTCGAGTTATGGGTTGGACTGTCGTTTTCTTTCTAAACGAGACCTCGTGAAGTGCATGTTTTTCTCTGTGATTGGGGCAAACCTCCAGGAGTTAATGCTGTTACCTACGTTAATGGGAGATTCCGCTGTCAGGCATGTTAGTGGTGTAATCATGACTAGAGCTGTTCGTGGTAGGATACTCAAGGATGTGAATGGTGATATTAGTGATCATCTACGCAACCACCTTCATCTGACAAACTGTATTCACTTGAAGAACCACATGCACAGGACCAGCCCCATACTGGCTCACAGGTCACTTATGAGAGACCTTGTTGTGCTGCAGAGGTCAAACTCTCTTAGGGACCCTTCTGCAAGTCCTTCATCATGGCATTCATCTTCTATAGCTGATGCACTTTCCAAGAGAATTATAAATGATGCCATGTTTCAGGAGGGAAGAAGGTCTGTAGGCATAGAGCGGAGGAAGGAATGTAGGAGATTATCAGGACCCTCACCACCGATGGTCACTTTAGGTACATCAAAAGTTGCCCCAAGTGAGGATGGTGACAATGGTGTACTGGCAAGTAGTAAACATGGCATTGGGAGTGGAATAGGGAATGGGATGAAAGTTGGGAGAGAAGAATCTGGCTGGAAGAATGATAGGCCTGATTACTTGGGTGTTAGTGAAGAGCAACCTCTCAATCAACATGGCAGAGACTTGGCTCAAGATGTCATTTCAAGGCATTCTGAATCTAAAGAGAGAAAGGGCAAACAAATGGGAAAGCATGTTAGAGATATTCAAGTTAAGACCCTTTCTGAGCAGTTGAATGATGTTTCACTTGATAGCGATGATATAGCTTCCTCAAATATTCATTTTCGTCGAAGGTCTCTGAGACAGGAGAAAAGTATTGAGGAGCCAGATCCCGGCATGCGTGGTAGCAATGGATTGAAAAGGGTAAGAAGGCGTAAACACCAACGAGCTAGAAGAACTAAGGCTGTTATGGCATCAAGAGATGCAGGAGGTGAGAATGAATTGTCTGTGGCTTCCAACTCATTTGCTCAAGGTTCAAACCACCCTAAATATCATATGCAGGAGGGTGAGAATTGTATAGATGAAAATCTTACTAGGGCTCCCAAAAATGGGTGTGGCATTCCTTGGAATTGGTCCAGACTTCATCATAGAGGTAAAACATTCCTTGACATGGCTGGAAGAAGTTTTTCTTGTGGTTTATCTGACTCGAGGTTAAAGAAAGGAACATTGGCTGCCAATGGAAGTAATATCCCTGAGATGCCTGTGTATTTTGATCACTCAAGCTCATCTACTAAGTCTGATGCAGAGGCCCAACCTTTGCTAGTTGATGCACCTGGATCTCAGGGAAACGGTGAAAATGCTTGCTGGGGGCATGACTTTTCTGGGGAACTTGCTATATTTGCTAATAATTTGTACAAGCATGATATTGATTCTGACATTGCTTCTGAAGCTAGATCTGGTGGTCATCATAAAATGAAAGGGAATTGCCAAAGCAGACACCAAAGCTTGACTCAAAAATATATGCCACGGACCTTTAGAGATATGGTTGGACAGAAGTTGGTGGTGCAAGCTCTTTCAAATGCAGTGATGAAAAAAAGAGTTGGGTTGTTATATGCATTTTATGGACCTCATGGCACTGGAAAAACTTCCTGTGCTCGCATATTTGCAAGAGCTTTAAATTGTCATTCTTCAGAACACCCAAAACCTTGTGGATTTTGTAAGTCCTGCATGGCATTTGACATGGGTAAGAGTAGAAGTATAAGAGAAATTGGTCCAGTCAGCAATACTGATTTTGAGAGTATCATGGATCTACTTGATAAAATGATTATTGCCCAGGTTTCATCTCAATACAGAGTGTTTATTTTTGATGACTGTGATACTCTGTCAACTGATTGCTGGAGTGCCATATCAAAGGTCATTGATCGAGCACCTAGACATGTGGTTTTTATCCTTGTCAGTTCAGGTCTTGATGTATTGCCTCATATAATAATATCTAGATGTCAGAAATTCTTTTTTCCAAAGCTGAGGGATGCAGATATTATATATACATTGCAGTGGATTGCTACAGAAGAAGGTCTAGAAATTGATAAGGATGCACTGAAGCTCATTGCTTCAAGATCAGATGGATCATTGAGAGATGCTGAGATGACCCTTGAACAATTGAGTTTACTTGGGCAGCGAGTTTCTGTTCCTCTCGTTCAGGAATTGGTAGGGCTTATATCTGATGAGAAATTGGTCGAGCTGCTTGATCTGGCGTTATCTGCTGACACAGTTAGCACCGTCAAGAATTTGAGAGTGATCATGGAAATGGGTATTGAGCCATTAACTTTAATGTCACAGCTTGCTTCAGTAATTACTGATATACTCGGTGGCACCTATGATTTCACAAAACAAAGGCAAAGAAGGAAATTCTTTCAGAGACAACCCTTATCCAAAAAAGAAACGGGAAAGCTGCGTCAGGCTTTGAAAACTTTATCTGAGGCTGAGAAGCAATTGAGGATGTCCAATGACAAACTAACATCGCTGACAGCAGCGTTGCTTCAACTTGCTCCTGACCAACAATATATGTTGCCTACTTCAGCTGATACTAGTTTCAATCATACTCCCTTGGCCCTGAACAACACAGATGTGAGAGAAGCAGACAGAAGAACTAACAGTCATGTTGCCAGAGAGAGACGTTTATCAGTGGATGCTAGAATGGAAAATCTCCATGCCAGAATTTCAGCTGATAATATGACAAGGGGTCTTAGTTCAGAGAGAAGAAGACTTTCCGACACTGGCTTCGCTCCTCAACATGCATCTTCACATGCGACCGATATGATTGATACTAATGGGAGGCAGAATGGTAAAAGCCGTAAAGGTCAAGAGCTATGGTTAGAGGTGCTTGAGAGGATTCAGGTTAATGGTCTGAAAGAGTTCTTATATCAAGAAGCCAAGCTGATCTCTGTTAGTTTTGGTTCAGCCCCGATCGTGCAGCTAATGTTTAGTTCCCAGCTTACCAAATCTACTGCTGAGGAGTTCCGGGACCACATCTTAGAAGCATTTGAATCTGTCCTTGGATCTTCTGTGACAATAGAAATTAGATGTGAAACAAATAAAGACGCGAGTTCAGGGGTTCGTCCACCTCTTGTCTTGCCAGCTACTCAAAACAGTTCATCTAAGATTCGGGACTTAAATGGAGGAGTTAGTGCTCAAACTCGTGCTTTGCACCTTGAATCTGTTGAAAAGAGAAAGAGCGAAATCGTAGAAGAAGCAGATTCTCCCGTAGAGCGCAAGAGTACTGAGCAGCAGGTTGATGCTCATGCAACATCATATAAATGTTCAGCAGGTACATGCACAGCACAAGCATCACCAGCTTCCCACAGGAAGCCAACTTTGAAGCCACTCTCAAGAAAGCACGGGGAACAAAGGTTGAGTCAGAGTCTGGTTAGAAGTAAAGTATTACTTGCTCACGTCATTCAGCAGGCAGAAGGATCTGCACAGCGAAGTGGGTGGTCAAAATGTAAAGCGGTTTCCATCGCTGAAAAGCTTGAACAAGAGAATCTGAGACTGGAGCCCAGATCAAGGAGCTTACTATGCTGGAGAGCATCTAGAGTAACCCGTGGGAAGCTTTCACGCTTGAAGGTTCGAACTGGAAGACCACAAGCTTTCTTAAAAATTGTGTCCTGTGGGAGATGTCTGTCTACTAAAACTTCAAGATAG 3855 0.4311 MDTSNLMALCPVFIGWGVSLSPPTTDLSAHRVFLVTPHSTRCYTLFLSLSSYGLDCRFLSKRDLVKCMFFSVIGANLQELMLLPTLMGDSAVRHVSGVIMTRAVRGRILKDVNGDISDHLRNHLHLTNCIHLKNHMHRTSPILAHRSLMRDLVVLQRSNSLRDPSASPSSWHSSSIADALSKRIINDAMFQEGRRSVGIERRKECRRLSGPSPPMVTLGTSKVAPSEDGDNGVLASSKHGIGSGIGNGMKVGREESGWKNDRPDYLGVSEEQPLNQHGRDLAQDVISRHSESKERKGKQMGKHVRDIQVKTLSEQLNDVSLDSDDIASSNIHFRRRSLRQEKSIEEPDPGMRGSNGLKRVRRRKHQRARRTKAVMASRDAGGENELSVASNSFAQGSNHPKYHMQEGENCIDENLTRAPKNGCGIPWNWSRLHHRGKTFLDMAGRSFSCGLSDSRLKKGTLAANGSNIPEMPVYFDHSSSSTKSDAEAQPLLVDAPGSQGNGENACWGHDFSGELAIFANNLYKHDIDSDIASEARSGGHHKMKGNCQSRHQSLTQKYMPRTFRDMVGQKLVVQALSNAVMKKRVGLLYAFYGPHGTGKTSCARIFARALNCHSSEHPKPCGFCKSCMAFDMGKSRSIREIGPVSNTDFESIMDLLDKMIIAQVSSQYRVFIFDDCDTLSTDCWSAISKVIDRAPRHVVFILVSSGLDVLPHIIISRCQKFFFPKLRDADIIYTLQWIATEEGLEIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRVSVPLVQELVGLISDEKLVELLDLALSADTVSTVKNLRVIMEMGIEPLTLMSQLASVITDILGGTYDFTKQRQRRKFFQRQPLSKKETGKLRQALKTLSEAEKQLRMSNDKLTSLTAALLQLAPDQQYMLPTSADTSFNHTPLALNNTDVREADRRTNSHVARERRLSVDARMENLHARISADNMTRGLSSERRRLSDTGFAPQHASSHATDMIDTNGRQNGKSRKGQELWLEVLERIQVNGLKEFLYQEAKLISVSFGSAPIVQLMFSSQLTKSTAEEFRDHILEAFESVLGSSVTIEIRCETNKDASSGVRPPLVLPATQNSSSKIRDLNGGVSAQTRALHLESVEKRKSEIVEEADSPVERKSTEQQVDAHATSYKCSAGTCTAQASPASHRKPTLKPLSRKHGEQRLSQSLVRSKVLLAHVIQQAEGSAQRSGWSKCKAVSIAEKLEQENLRLEPRSRSLLCWRASRVTRGKLSRLKVRTGRPQAFLKIVSCGRCLSTKTSR 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0963 1284 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 555 942 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 965 1003 - -
Bisa07g0963 1284 SMART AAA_5 585 727 IPR003593 GO:0016887
Bisa07g0963 1284 FunFam DNA polymerase III subunit gamma/tau 548 725 - -
Bisa07g0963 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 776 IPR027417 -
Bisa07g0963 1284 Gene3D - 728 789 - -
Bisa07g0963 1284 FunFam DNA polymerase III subunit gamma/tau 727 789 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 332 348 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 332 385 - -
Bisa07g0963 1284 NCBIfam DNA polymerase III subunit gamma/tau 552 900 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Bisa07g0963 1284 Coils Coil 862 896 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 979 1002 - -
Bisa07g0963 1284 CDD HLD_clamp_pol_III_gamma_tau 726 789 IPR045085 -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 286 306 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 206 258 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 1162 1188 - -
Bisa07g0963 1284 Gene3D - 543 723 IPR027417 -
Bisa07g0963 1284 Pfam DNA polymerase III, delta subunit 568 726 - -
Bisa07g0963 1284 MobiDBLite consensus disorder prediction 356 371 - -
Bisa07g0963 1284 SUPERFAMILY post-AAA+ oligomerization domain-like 797 901 IPR008921 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0963 Bisa-ChrBisa07 24553938 24561146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0963 552 850 Core DNA Replication Machinery Family AT1G21690 22.667 4.92e-14 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0963 07 24553938 24561146 Bisa07g0963 07 24553938 24561146 ECH