Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0959 ATGGATGAAGCTCAGGACAGTTCTAGCTCGCTGCCTCCCTTCCTGACAAAGACTTATGAGATGGTGGACGATCCTTCCACTAATTCAATTGTTTCTTGGAGTGCTACCAATAGAAGTTTTATAGTGTGGAATCCGCCAGGATTTGCAAGTGAGTTGTTACCAAGATTCTTTAAGCACAATAACTTCTCGAGCTTCATCAGACAGCTGAACACATATGGTTTTAGAAAAGTTGACCCAGAACAATGGGAATTTGCAAATGATGATTTCATAAGAGGTCAACCACATCTTTTGAAGAATATTCATAGACGAAAGCCGGTACATAGCCATTCTTTACATAATCTCCAAGGACAAGGAGCTTCTCCATTAACAGAATCAGAAAGGCAGAGTTTAAAAGATGAAATAGAGAGGCTGAAACACGAAAAAGAACAACTATGTTTGGAGTTACAGAAACATGAACAGGAGTGGCAAGAAAATCAGATACAAATAGAATGCTCAAAGGAGCGCTTGGGAAAGTTGGAGAGGAATCAACAAAAGTTGGTCTCTTCAGTTTCTCAAGTGTTGCAGAAACCGGCAATTGCCTTAAATCTTTTGCATCTGTCAGAAACCCTGTATAGAAAACGAAGGTTGCCCAAAAGTGGTTACCTTTCTGATGAAGCTGGCATTGAAGATGCTTTGGAAACTTCCCCAATGTTACTCAGAGATAATGCAGACAGTACATCTGTTCTGGCAATAAACATGGAGCGACTGGATCAGCTGGAGTCATCGCTGGTATTATGGGAAAACATTGTTCACGATTTTGGTGATACCTTTGTTCATATTAATTCAAGTATCGATTTTGGTGAATCTACAAGTTGCGTAGATAGTCCCTGCTATCTCTTGTGTGCAATTAGATGTTGA 897 0.4002 MDEAQDSSSSLPPFLTKTYEMVDDPSTNSIVSWSATNRSFIVWNPPGFASELLPRFFKHNNFSSFIRQLNTYGFRKVDPEQWEFANDDFIRGQPHLLKNIHRRKPVHSHSLHNLQGQGASPLTESERQSLKDEIERLKHEKEQLCLELQKHEQEWQENQIQIECSKERLGKLERNQQKLVSSVSQVLQKPAIALNLLHLSETLYRKRRLPKSGYLSDEAGIEDALETSPMLLRDNADSTSVLAINMERLDQLESSLVLWENIVHDFGDTFVHINSSIDFGESTSCVDSPCYLLCAIRC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0959 298 Coils Coil 120 154 - -
Bisa07g0959 298 ProSitePatterns HSF-type DNA-binding domain signature. 53 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g0959 298 Gene3D - 6 104 IPR036388 -
Bisa07g0959 298 MobiDBLite consensus disorder prediction 107 126 - -
Bisa07g0959 298 FunFam Heat shock transcription factor 1 7 104 - -
Bisa07g0959 298 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 211 IPR027725 -
Bisa07g0959 298 SUPERFAMILY "Winged helix" DNA-binding domain 9 103 IPR036390 -
Bisa07g0959 298 MobiDBLite consensus disorder prediction 110 125 - -
Bisa07g0959 298 Pfam HSF-type DNA-binding 14 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g0959 298 PRINTS Heat shock factor (HSF) domain signature 65 77 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g0959 298 PRINTS Heat shock factor (HSF) domain signature 52 64 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g0959 298 PRINTS Heat shock factor (HSF) domain signature 14 37 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa07g0959 298 SMART hsfneu3 10 103 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0959 Bisa-ChrBisa07 24542302 24543282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0959 7 289 HSF AT4G18880 56.294 9.99e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa07g0959 HSF_DNA-bind 1.2e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa03g0529 03 6681999 6683141 Bisa07g0959 07 24542302 24543282 CCT