Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0918 ATGGGTGTAGAAGGCGGTAATCCCACGCCCATGAGGATTGAGGACTCGGGAGTTGGGCTTGTCTGAGAATTAATGGGGTCTATGAACTGGCTGGGTTTCTCTTTGTCTTCTCAAGAACTTGCATCGCAGTCTGCTAATGAAGCTGATCCCTCTCGACTCTGCTTCACCTCCGACGAAATCTCCGGCGACTACTGTTATCTCACCTCCGACGACTCCGCTCCTCATTCCCTCAACCTCCCTCCTTCCTTTGGAATCTTTGAAGCTCTTAACAGAGACAATATCACTAATAACCAAGAATGGGGTTTGGTAAGCAGCAAGAGAGATGCTGATGCAATGGAGAGTAATTTACATTCACAAGAGCCGAAGCTTGAAAACTTGCTGGGGCGACACTCACACTTCTCTTACGGTGAGTCCTCCGCAGCAGATCATACCACCACCATATTCCCCAACTCTCGTCTACAAGCTGCAGCACCAGGTGGCACTGCTACTACTACTTCTTCTACTACTACTAATAATGCCTCTATTGGGCTCTCTATGATAAAGTCATGGCTTCGAAACCAACCCACAACAACACCCACCTCGCATAACAACAACAACAACAACCACAAGAAGGAAAGTGCGAGTGATGGTGGTAACAGTACTCATCAAACTCACAGTTTATCTCTTTCAATGAGTACGGGATCACAGTCACGTTCTTCTTCACCAGCACTGCCTCTTCTTGGAGCACTCACTTCTTCAGCCTCCACTCTCACTACTCCTCCTCCTCCTGTTGATTCACTTCCCAGAAAGTCCAGTAATGACACTTTTGGTCAGAGGACTTCCATATACCGTGGCGTCACTAGGCATAGGTGGACCGGCAGATATGAGGCTCACCTCTGGGATAATACTTGTAGACGAGAGGGTCAAACCCGCAAAGGAAGGCAAGGAGGTTATGACAAAGAAGAAAAGGCAGCTCGATCTTACGATTTAGCGGCACTAAAATACTGGGGAACCACCACTACTACAAATTTCCCGGTAAGGAAGAGTAGTGGATTTTCTCGCGGTGCATCCATTTATCGAGGAGTAACCAGGCATCACCAACATGGTAGATGGCAAGCAAGGATTGGAAGAGTTGCAGGCAACAAAGATCTGTATCTGGGAACTTTCAGCACGCAGGAAGAAGCGGCAGAGGCATATGATATAGCAGCGATCAAGTTCCGAGGAGTAAACGCCGTCACGAACTTCGACATGAGCAGATACGACGTTAAGAGCATTCTCGAGAGCACCACCTTGCCCATTGGTGGCGCTGCCAAGCGTCTCAAAGATGGAAATGTTAATGTTATCCCTTCTCCTCCTCCTCCTCCTCCTGCTCTTCCTCTTCCAGACTCCTTTCATTACCCTTTTGGACAAAGGCTCTGGTTCAAGCAGGAGCTTCCTTCTCAACAACCTCAATCTGACGCCCACAGTTTCCTTCATTCTCATCCTGCACCTTTCCTCACCATGGACTCTTCAATGCCTCTGGATGTGAATGTTAATATTAATCATCACTCCCTCCTTAATGGTGATGGTTCTAGTTATGGAGGAGGAGGAGGAGGCTGCCTCAATATTCCCCTTCCTGATGCTGCTACCCAAAATCAGAGAACCATTATTAATTCTGGTAGTCATGGCTTGCAATTGGGAGATTACGGCACTGTGTTTGCCTCTACTGATCATGATCCTTATCATGCAGTTAAAGCTAGTGCGTACGATCAAGATCAAGCCAACACTTGGCTCCAGTATGCAATTCCCAGATCGTCTACCACAATGCCTCTCTGCCCGCCTTTCACTTTGTTACATGATTAG 1821 0.4767 MGVEGGNPTPMRIEDSGVGLVXELMGSMNWLGFSLSSQELASQSANEADPSRLCFTSDEISGDYCYLTSDDSAPHSLNLPPSFGIFEALNRDNITNNQEWGLVSSKRDADAMESNLHSQEPKLENLLGRHSHFSYGESSAADHTTTIFPNSRLQAAAPGGTATTTSSTTTNNASIGLSMIKSWLRNQPTTTPTSHNNNNNNHKKESASDGGNSTHQTHSLSLSMSTGSQSRSSSPALPLLGALTSSASTLTTPPPPVDSLPRKSSNDTFGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQTRKGRQGGYDKEEKAARSYDLAALKYWGTTTTTNFPVRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDGNVNVIPSPPPPPPALPLPDSFHYPFGQRLWFKQELPSQQPQSDAHSFLHSHPAPFLTMDSSMPLDVNVNINHHSLLNGDGSSYGGGGGGCLNIPLPDAATQNQRTIINSGSHGLQLGDYGTVFASTDHDPYHAVKASAYDQDQANTWLQYAIPRSSTTMPLCPPFTLLHD 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0918 606 ProSiteProfiles AP2/ERF domain profile. 351 409 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 Gene3D AP2/ERF domain 275 340 IPR036955 GO:0003700|GO:0006355
Bisa07g0918 606 Gene3D AP2/ERF domain 351 411 IPR036955 GO:0003700|GO:0006355
Bisa07g0918 606 Pfam AP2 domain 351 401 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 Pfam AP2 domain 275 330 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 199 439 - -
Bisa07g0918 606 MobiDBLite consensus disorder prediction 111 274 - -
Bisa07g0918 606 ProSiteProfiles AP2/ERF domain profile. 275 338 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 FunFam AP2-like ethylene-responsive transcription factor ANT 274 340 - -
Bisa07g0918 606 MobiDBLite consensus disorder prediction 111 127 - -
Bisa07g0918 606 PRINTS Ethylene responsive element binding protein signature 276 287 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 PRINTS Ethylene responsive element binding protein signature 391 411 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 SMART rav1_2 275 344 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 SMART rav1_2 351 415 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 SUPERFAMILY DNA-binding domain 274 339 IPR016177 GO:0003677
Bisa07g0918 606 CDD AP2 274 339 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 MobiDBLite consensus disorder prediction 137 253 - -
Bisa07g0918 606 CDD AP2 350 411 IPR001471 GO:0003700|GO:0006355
Bisa07g0918 606 SUPERFAMILY DNA-binding domain 350 411 IPR016177 GO:0003677
Bisa07g0918 606 FunFam AP2-like ethylene-responsive transcription factor 350 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0918 Bisa-ChrBisa07 23586686 23592621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0918 121 456 AP2-EREBP Transcription Factor Family AT5G17430 53.591 2.63e-109 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Bisa07g0918 AP2 1.7e-08 CL0081