Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0868 ATGTACATAGCTTCCATGCGAAAGTCTTTCAAGGACTCCTTGAAAGTGCTTGAAGCTGATATCCAGCATGCCAATACCCTAGCATCAGATTTTCCAAGGGAGTATGATGGTGCATGCCTTCAGATGAGAATGTCATACAGTCCAGCTGCACACCTGTTTCTTTTTCTAGTGCAATGGACTGACTGTAATCTTGCTGGAGCCCTTGGATTATTAAGAATCCTAATCTACAAGGTTTATGTGGATGGCACAACCACCATGTCTACACATGAAAGAAAAGCAAGTATTAGAGAATTTTATGCGGTCATATATCCCTCTTTATTGCAACTTCAAAAGGGTGTTACTGATACTGAGGATAAAAAGCAAAAGGCTGTATGCATGGAGCGGTATCGAAGGAGAGATGATGAGGAATATAGGCAAACTTCAGATGTAGACGTTGAAAGAGATGAAGAATGCGGTATATGCATGGAGATGAATAGTAAGATTGTGTTGCCCAACTGCAACCATGCCATGTGCTTGAAATGTTACCGTGAATGGCGAACAAGATCACAATCATGCCCCTTCTGCCGGGACAGCCTCAAGAGAGTGAACTCGTGTGATCTCTGGGTATTCACTGACAGTAGGGACGTAGTAGATATGGCAACAGTGACAAGGGAGAATCTTAGAAGGCTTTTCATGTACATAGATAAGCTGCCTTTGATCGTTCCGGACTCCCTTTTTGACCCTTATGACTCTCACCTAAGATAA 744 0.4274 MYIASMRKSFKDSLKVLEADIQHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDKKQKAVCMERYRRRDDEEYRQTSDVDVERDEECGICMEMNSKIVLPNCNHAMCLKCYREWRTRSQSCPFCRDSLKRVNSCDLWVFTDSRDVVDMATVTRENLRRLFMYIDKLPLIVPDSLFDPYDSHLR 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0868 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 200 IPR013083 -
Bisa07g0868 247 PANTHER RING FINGER PROTEIN 41, 151 8 245 - -
Bisa07g0868 247 ProSiteProfiles Zinc finger RING-type profile. 151 189 IPR001841 -
Bisa07g0868 247 ProSitePatterns Zinc finger RING-type signature. 166 175 IPR017907 -
Bisa07g0868 247 Pfam Zinc finger, C3HC4 type (RING finger) 148 194 - -
Bisa07g0868 247 FunFam RING/U-box superfamily protein 129 198 - -
Bisa07g0868 247 SUPERFAMILY RING/U-box 137 194 - -
Bisa07g0868 247 SMART ring_2 151 188 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0868 Bisa-ChrBisa07 22349348 22353083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0868 99 206 C3H Transcription Factor Family AT5G01960 29.825 3.13e-06 45.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0868 07 22349348 22353083 Bisa07g0868 07 22349348 22353083 CCT