LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g0842	ATGATTGACGCTACTCACTTGAGAGTAGAAGACGATTGTGGGTTAGGAGTTACAGTCCTAGATCAACATGGCAGAGTCATAACTAGTGTATCCAAAAAGATTATTGCAGTGCTTTACCATGGAGGATTTTGCAATTGGAAAATTAGGAATGTGATTACATATTCAAAGTACCTGAGAGAGATGTCTTCAGTCTTCGTTTACTCAAATGAAGCAGTTCACTGGGTGGCAAAGATGGAGGAGTTGAGGAGATTGGCTCAGAATTGGCATCTTCTTTCTTTCTTCTTCTTCTTTACCCTTGACGGGGAGGTGGGACGAGTCCTCACCTTGGCTCGTATTATGGTATTAGTAAGCGCTCATTTGGCAGCACGAATTGCGCTGGGTTTGATCGCTTTGTTATTGTTAAGGATTGGTAAAGCAGCTTCACGGTTCATCTACCAGAGCTTGCAACAAATATCAATGGCTTACAGACGATGTCTCTTGATAAGAGGAAAACTCATAGATTGGAATTGCCACCCATCTTTGAGTTACGTTTTCCATAGTGATGAACATAAACGTGACTGCCCGAACGAAAAATTATACGCTACAGAAGTTGGTCATTTTCTCCCAAAAGAGTCATTTGGAAGCTCCATAAATGGATCAGTAGGTTTTGCTGCCTCTTCTCGACATGGAATATCTTCAAACAGTTTCCTTTTTCTATGCTCTGGATATTCTTTCTGCAGATATATGTCGACAGATATAAATCAGGGTTCAAGTAATATTGAAATAATGAGTGATGTAGCAGAAGTCCTCAAAGACACAACAATGGAGGCTGTTGCTTCCCAGGTTCCTGTAGTTAATGAAGTTGCAATTGCTGCAGCTGATTCATTTTTACCTGTTCAAGCTTTGCAGTACTTGATAGATGCTGTGCATTCTTACACTGGTTTAAACTGGTGGGCAGCCATTGTTCTAACAACCCTTTTGATTCGAGGCGCGACACTACCACTCTTAATTAATCAACTTAAGGCCACCTCTAAGCTTACTCTAATGAGGCCTCACTTGGAGGAGATTAAGCAACAGATGCAAGATAAGGCTATGGATCCTGCAGCTGTTGCTGAAGGTCAGAAGCGGATGAAAAAGCTATTCAATGAATATGGTGTGAGCCCATTTACTCCATTGAAGGGACTCTTCATCCAAGGTCCTATCTTTGTCAGTTTTTTCCTTGCAATATCAAACATGGCTGAAAAAGTGCCATCATTCAAAAATGGTGGAGCTTACTGGTTCCTTGATCTATCAACTCCAGATAGTTTATATGTTTTCCCAGTTTTGACTGCACTGTCATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGAATGGAAGGAAATCCTTCTTCTGGCATCATAAAAAATGTCTTTAGGGTCTTTGCTGTTCTTACAGTTCCTCTTACAACGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGGGTATGGACTTGTGCTTAAGGTTCCTGGCGTTAAGAAAGCATTAGGTGTTCCTGAAATACCTGCTGCAGCACCCACCAATGCTCCACAATCTCCCTTTTCTGTCTTTCCAGCAGTTAAAAAAACTACATCGGCAGCCACAGAATCAAACTCGGTGCCAGTTGGACAATCAAAATTTCCAGGTCAGAAGATTTCTTCTTCTTCTGTTATCAGTCAGAGGCTTAGAAGTTCAGAGAAACAAGTGAAAGGGAGGAAGAAAAACAGGAAGAGCTGA	1758	0.409	MIDATHLRVEDDCGLGVTVLDQHGRVITSVSKKIIAVLYHGGFCNWKIRNVITYSKYLREMSSVFVYSNEAVHWVAKMEELRRLAQNWHLLSFFFFFTLDGEVGRVLTLARIMVLVSAHLAARIALGLIALLLLRIGKAASRFIYQSLQQISMAYRRCLLIRGKLIDWNCHPSLSYVFHSDEHKRDCPNEKLYATEVGHFLPKESFGSSINGSVGFAASSRHGISSNSFLFLCSGYSFCRYMSTDINQGSSNIEIMSDVAEVLKDTTMEAVASQVPVVNEVAIAAADSFLPVQALQYLIDAVHSYTGLNWWAAIVLTTLLIRGATLPLLINQLKATSKLTLMRPHLEEIKQQMQDKAMDPAAVAEGQKRMKKLFNEYGVSPFTPLKGLFIQGPIFVSFFLAISNMAEKVPSFKNGGAYWFLDLSTPDSLYVFPVLTALSFLITVECNMQEGMEGNPSSGIIKNVFRVFAVLTVPLTTGFPKAIFCYWITSNLFSLGYGLVLKVPGVKKALGVPEIPAAAPTNAPQSPFSVFPAVKKTTSAATESNSVPVGQSKFPGQKISSSSVISQRLRSSEKQVKGRKKNRKS	585

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g0842	585	NCBIfam	membrane protein insertase YidC	309	497	IPR028055	-
	Bisa07g0842	585	CDD	5TM_Oxa1-like	307	504	-	-
	Bisa07g0842	585	MobiDBLite	consensus disorder prediction	542	585	-	-
	Bisa07g0842	585	Pfam	60Kd inner membrane protein	310	499	IPR028055	-
	Bisa07g0842	585	PANTHER	OXA1	265	581	IPR001708	GO:0016020\|GO:0032977
	Bisa07g0842	585	MobiDBLite	consensus disorder prediction	542	571	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g0842	Bisa-ChrBisa07	21837580	21850581	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g0842	313	508	Chloroplast and Mitochondria Gene Families	AT2G28800	26.047	8.52e-08	52.8