LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g0815	ATGGGGACGGAGGTGATGGGGTCGTGGGGCACGTGGGAGGAGCTCCTCCTCGCCGGGGCTGTTCTCCGGCACGGGACCCGAGACTGGGACGTCGTCGCTGCCGAGCTCCGAGCTCGAACAGTTTGTCCGTACACCTTCACTCCCGAGGTTTGTAAAGCCAAGTATGAAGACTTGCAAGAACGCTACTCTGGCTGCACGGCATGGTTCGAGGAGCTTCGGAAGAAAAGAGTCGCAGAGCTGAAGAGAGATTTGGAGCAATCTGAAGACTCAATTGGGTCTCTTGAATCAAAGCTTGAGTCTCTCAAAGCAGAGAAGAAGGAGAAAGAAAGAGATGGTTCTCACGATGTGATCCACAATAACAATGTCCCAGGTTGTGCAGAACCAAAGCTACACTCACCTCTGCAGAAACTAGAGAGAGTGGAATCTTCCACTAAAGATTCATCGAAGGATGGTCTGTCTGCTGGGAGCTTCACACACGAGACCAGATCAAACTGGTCTCCCTCCGACCAAGAGATGGAAACAAAGACAGAAGCCTCACACTCACACTCGTGTTACCAGTACGAGAAAGCTTCGAACGTGGGGGACAAGCTGACATGTACTATGTACGGAGGACAAATCAGAGGAAGCACCATAAAGAAGAGGAGAGGGAAGAGGAAGAGGAAAGACTGTAGCAGAAACTACAATGGGAAGGAGACGAGTGTGGGAGACAGTGAGTTCTTGTTGGATTCACCTGGGGATGTGGTTGTGTCTGGAAGCAAAGAGAATTGGACCAGCAACAATGGAGGTGTGGGGGAACAAGAACAACAACGGCAACAATGTCTGAGTTTCAGAAAGGAAGGAGGGGAGGTGGAGGGTTTGATGGAGATTTTGGAGTGTGTTTTGGAAAATAAGGTTGCCTCTGCTTTTAGACGTCGCCTTGATAGTCAGAAGAGAGGAAGGTACAAGAAGATGATCAGAATCCACATGGACTTGGACACCATAAGGTCAAGAATCTCCACCAACGCCATTAAATCAACAATGGAGCTTTACAGAGACCTCCTCCTTCTCACAAACAACGCTTTAGTCTTCTACTCCAAGACCACTCGCGAGTACAAATCTGCTCTGCTCCTCAGAGACCTCGTCACCAAGAAACTCAGGCAGAATCCCCAAAACCTAAAAATCAAAACATCACTACCCACCCAGCAAGAAAAAGAAGAAGATCATACTCATAGCCTCTCTGTCAAAACACAAGCTCATAGCATTGCTCCTGTGAAACCCCGAAGCGTGAGACCAGGAAACAGGAAGATTGTAGCAGCAAAGGTAGAAGGAATCAATTCTGCTTCTGGGGTTTCTGTTGGAGCTTCTAAGAAATCGTCACCTGCGAAACTCCACTCTGATTCTTCACCACTCTCAGTGGAGTCTCTGGCTGTCAAGAAAAAGAAAGGGATTGGAAGACCTAAGAAGGTTGGACGTGGAAATGCTGCAGGGCAAGCTCCTGTAATGGCGGTGAAGGGAAAGAGAAGAGTTAGAGCTAAGTGA	1518	0.4868	MGTEVMGSWGTWEELLLAGAVLRHGTRDWDVVAAELRARTVCPYTFTPEVCKAKYEDLQERYSGCTAWFEELRKKRVAELKRDLEQSEDSIGSLESKLESLKAEKKEKERDGSHDVIHNNNVPGCAEPKLHSPLQKLERVESSTKDSSKDGLSAGSFTHETRSNWSPSDQEMETKTEASHSHSCYQYEKASNVGDKLTCTMYGGQIRGSTIKKRRGKRKRKDCSRNYNGKETSVGDSEFLLDSPGDVVVSGSKENWTSNNGGVGEQEQQRQQCLSFRKEGGEVEGLMEILECVLENKVASAFRRRLDSQKRGRYKKMIRIHMDLDTIRSRISTNAIKSTMELYRDLLLLTNNALVFYSKTTREYKSALLLRDLVTKKLRQNPQNLKIKTSLPTQQEKEEDHTHSLSVKTQAHSIAPVKPRSVRPGNRKIVAAKVEGINSASGVSVGASKKSSPAKLHSDSSPLSVESLAVKKKKGIGRPKKVGRGNAAGQAPVMAVKGKRRVRAK	505

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	441	505	-	-
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	210	229	-	-
	Bisa07g0815	505	SMART	sant	5	61	IPR001005	-
	Bisa07g0815	505	SMART	bromo_6	275	383	IPR001487	GO:0005515
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	441	465	-	-
	Bisa07g0815	505	Pfam	Bromodomain	287	367	IPR001487	GO:0005515
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	147	172	-	-
	Bisa07g0815	505	CDD	Bromodomain	286	378	-	-
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	392	406	-	-
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	132	146	-	-
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	388	421	-	-
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	100	116	-	-
	Bisa07g0815	505	Gene3D	-	276	387	IPR036427	GO:0005515
	Bisa07g0815	505	Coils	Coil	77	111	-	-
	Bisa07g0815	505	ProSiteProfiles	Bromodomain profile.	294	364	IPR001487	GO:0005515
	Bisa07g0815	505	PANTHER	DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN	7	415	-	-
	Bisa07g0815	505	SUPERFAMILY	Bromodomain	283	384	IPR036427	GO:0005515
	Bisa07g0815	505	CDD	SANT	8	55	IPR001005	-
	Bisa07g0815	505	MobiDBLite	consensus disorder prediction	100	183	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g0815	Bisa-ChrBisa07	21138772	21145345	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Bisa07g0815		Bromodomain	7.2e-13	No_clan

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa07g0815	07	21138772	21145345	Bisa07g0815	07	21138772	21145345	CCT