Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0799 ATGGCCACTGTTCCGTCTTCTTCGTCGTCGTCAAAGGTGTGCTACAATTCAGAGTGCAAGGAATTGAAGTCAGACAGACCTAAGAAGGGCTGGAGGCTCCGTAGTGGAGAGTTTGCAGAGCTTTGTGATCGATGCGGTTCTGCTTTGGAAGAAGGAAGATTCTGTGAAATTTTTCACTTGAATGCTTCTGGTTGGAGAACTTGTGAGACATGCGGGAAGGGGATTCATTGTGGATGTATTGTTTCAAGTAATGCCTTTATGTTGTTGGATCCCGGGGGCATTGAATGCATTGCATGTGCCAGGAAAAATATTATTTTGTCATCCAATCTGCCTTGGTCACCACCTTTTTCTCTTCAAAGTCGTTTATCTGAGAGACTTAGAGACCTGTCTCCGAAAAATTGGAGTCAGTTAGCTGGATCAGGTCCTGTACCATGGAAGCAAGCACCCAGTCTGTTCAATCCAGCTTCTTCATCTGACCGGCATCCAGATGTGCCCTCTGTAGTTGAAATATCTAGTGTTGACAATATTTATGGAACTGAAAGGTTACCTGCCTCATCCCTGGAAAAGAAAAATGATGATCTGTCTGGAATATCAGCTAATTGGAATGTTAAGATTGGTGCTCGGGAAATGATGTTTATGAATGGAATGCGGAATGATGAAAAGTCAAGTTCATGCTTAAATATGTGTCAGCAGCCTCCTTCTCTAAAAGAAGATTTGTCAACCCAACCATTTGGTTTGACAGTTCCTTATGCATCTCAAAATGAAAGAAATGGTCAAATTGGGGTGACTGGAAGTCATCCACAACAAACTCCTCCACCTTCTCATGGAAAGCAATTTAGTGGTCCTGTACATATTCCACTTGATTCATCAGGTGAAACACAGGTTCGGAATGGACGGCCCAGAGCAGATGCCAGAGGAAGAAACCAGTTTCTGCCACGATACTGGCCGAGGTGCACAGATCAAGAGCTACAACAAATATCTCTCGATTCTGATTCTGTAATTACACCATTGTTCCAAAAAACATTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTCTAGTGCTACCAAAAAAATGCGCAGAGGCCTACTTTCCACCAATCTCTCAGCCCGAAGGGTTGCCACTTAAAATCCTCGATGCAAAAGGCAAGGAATGGATATTTCAGTTTCGCTTTTGGCCCAACAATAACAGTAGAATGTATGTTTTAGAAGGTGTAACTCCCTGCATACAGTCCATGCAATTGCAAGCAGGTGACACAGTAACATTCAGTCGGTTGGAGCCAGAGGGGAGGTTGGTTATGGGATTTCGAAAGGCTTCAAGTGCCACCCAATCTAATCAGGACAATGAAACAAACAAGAATGGAAATGGATATTCTACTCACGGTGAAGTTGAATTGGCAGATCCTAGTTCTTGGTCTAAAGTTGACAAGTCAGGATATATAGCAAAAGAAGCATTGGGGAGCAAATCTTCCATTTCTAGGAAAAGAAAGAGTAGTGCCTTGGGTTCAAAAAGTAAGCGTCTAAGAATTGAAAATGAGGATCTAATAGAGCTGAATATTACATGGGAAGAAGCTCAAGGCCTACTCCGTCCCCCTCCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCAGTGCTTGGGAAACCAACAATTTTCACCACTGATAATGTTGGGGAAAAGATCCAGTGGGCTCAATGTGAAGATTGTCAGAAGTGGCGCAAATTGCCGGCTAGTGCTCTTCTTCCATCTAGATGGACATGTGCTGATAATCCATGGGATCCAGAAAGATCTTGCTCAACAGCGCAAGAATTGACAGCGGAACAGCTTGAAGGTTTGCTACCCCCTTGTAACTCAGTGGTATCCAAGAAAATGAAGGCTGCCAAGCAGGATCCTGATAATGTTGACGCCTTGGAAGGACTTGACACTCTTGCAAACCTAGCTATCTTAGGAGAGGGGGAGGCACTACCTGTATCTGCCCAAGCCACAACAAAACACCCTCGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCAAGTGGGAAGGGCCCCAAGCATAAGCAGACATGCACCTGTAATGTCTGCTTAACAGTGAAGCGTCGTTTCCGTACCCTGATGTTACGACGTGAGAAGAAACAATCAGAGAGAGAAGCAGAAACAACACGTAAAAAGCAGCAGCATCAGCCACCGCAGCCACCGCCACCCATGTCAGAGATATTGCTTGATGATGATTCCCAGCCATGCAGTAACACAGGAGATAGTAGTCCAATCCAGAACAGGGAGGGCAATGAAGGATCTGATGATGACCCTAACAAGATAAAATCATCTGCCTCGCCATTTAAGGGTCAAATTGACCTCAATATCCAGCCAGAGCGAGAGGAAGAGCTGTCCCCTAGTTCAGAATCTGGGAGTATGATTAAGTTGCTCCACGATGCTACTGAGAGGTATCTGAGGCAGCAGAGTATGTCAAACTCTTTTGCTGGAGATACATCAGGCGGGCAGTCGCAGCGAGCTGGAGATGAAGAAGCAAGAGAAGAGAAACTTTGCAATGGTGTAGCCCTTGGCAATAGTAATCATAATGCCGATAAGGAACACGCCCAAACTTTGTCTATGAATGTTTGA 2655 0.4493 MATVPSSSSSSKVCYNSECKELKSDRPKKGWRLRSGEFAELCDRCGSALEEGRFCEIFHLNASGWRTCETCGKGIHCGCIVSSNAFMLLDPGGIECIACARKNIILSSNLPWSPPFSLQSRLSERLRDLSPKNWSQLAGSGPVPWKQAPSLFNPASSSDRHPDVPSVVEISSVDNIYGTERLPASSLEKKNDDLSGISANWNVKIGAREMMFMNGMRNDEKSSSCLNMCQQPPSLKEDLSTQPFGLTVPYASQNERNGQIGVTGSHPQQTPPPSHGKQFSGPVHIPLDSSGETQVRNGRPRADARGRNQFLPRYWPRCTDQELQQISLDSDSVITPLFQKTLSASDAGRIGRLVLPKKCAEAYFPPISQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKASSATQSNQDNETNKNGNGYSTHGEVELADPSSWSKVDKSGYIAKEALGSKSSISRKRKSSALGSKSKRLRIENEDLIELNITWEEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTDNVGEKIQWAQCEDCQKWRKLPASALLPSRWTCADNPWDPERSCSTAQELTAEQLEGLLPPCNSVVSKKMKAAKQDPDNVDALEGLDTLANLAILGEGEALPVSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKQQHQPPQPPPPMSEILLDDDSQPCSNTGDSSPIQNREGNEGSDDDPNKIKSSASPFKGQIDLNIQPEREEELSPSSESGSMIKLLHDATERYLRQQSMSNSFAGDTSGGQSQRAGDEEAREEKLCNGVALGNSNHNADKEHAQTLSMNV 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0799 884 MobiDBLite consensus disorder prediction 864 884 - -
Bisa07g0799 884 MobiDBLite consensus disorder prediction 256 276 - -
Bisa07g0799 884 SMART B3_2 338 439 IPR003340 GO:0003677
Bisa07g0799 884 Pfam CW-type Zinc Finger 571 612 IPR011124 GO:0008270
Bisa07g0799 884 FunFam B3 domain-containing transcription repressor VAL1 316 443 - -
Bisa07g0799 884 MobiDBLite consensus disorder prediction 437 458 - -
Bisa07g0799 884 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 11 842 - -
Bisa07g0799 884 MobiDBLite consensus disorder prediction 256 304 - -
Bisa07g0799 884 MobiDBLite consensus disorder prediction 827 848 - -
Bisa07g0799 884 MobiDBLite consensus disorder prediction 718 884 - -
Bisa07g0799 884 Pfam B3 DNA binding domain 338 437 IPR003340 GO:0003677
Bisa07g0799 884 CDD B3_DNA 336 437 IPR003340 GO:0003677
Bisa07g0799 884 MobiDBLite consensus disorder prediction 719 735 - -
Bisa07g0799 884 ProSiteProfiles B3 DNA-binding domain profile. 338 439 IPR003340 GO:0003677
Bisa07g0799 884 MobiDBLite consensus disorder prediction 754 772 - -
Bisa07g0799 884 SUPERFAMILY DNA-binding pseudobarrel domain 335 438 IPR015300 -
Bisa07g0799 884 Gene3D - 561 617 - -
Bisa07g0799 884 MobiDBLite consensus disorder prediction 437 470 - -
Bisa07g0799 884 Gene3D - 316 442 IPR015300 -
Bisa07g0799 884 ProSiteProfiles Zinc finger CW-type profile. 566 615 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0799 Bisa-ChrBisa07 20824763 20836756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0799 10 723 B3 DNA Binding Superfamily AT4G32010 45.152 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa07g0799 B3 9.7e-16 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0799 07 20824763 20836756 Bisa07g0799 07 20824763 20836756 ECH