Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0797 ATGAACGACCTAATCTCGGGCTCCTTCAAGAGGTACACAGACGTGAAGGAGCAGGTGTACATGAACGATGTGGAGGCGGGGAAGGAGAGCGTGAATCTGGACAAGTTCTTCGAGGAGGTGGAGGACGTGAAAGAGGACATGAGAAGCGTGGAGAAGCTGTACAGGAAGTTGCAGGAGGCGAACGAGGAGAGCAAGATCGTGCACAATTCCAAGACGATGAAGGAACTCCGGAGCCGGATGGACAAGGACGTCGAGCAGGTGCTGAAGCGGGTCAAGATCATCAAGGGCAAGCTCGAGGCTCTGGAGAAGTCCAATGCGGCTCAGCGACAGGTCCCGGGTTGCGGTCCGGGCTCCTCTGCCGATCGGACCAGAACCTCCATCGTGAGCGGGTTGGGGAAGAAGTTGAAGGACTTGATGAATGACTTTCAGGGCCTAAGAGCCAGGATGCAACTTGAATACAAAGAAACAGTGGAACGCAGGTATTTCACAATCACAGGAGAGAAGGCTGATGAAGATACCATAGAGAACTTGATAGCGAGTGGGGAAAGCGAGAGCTTCTTGCAGAGAGCGATTCAAGAACAAGGCAGGGGGCAGATAATGGACACCATATCAGAGATTCAAGAGAGGCACGATGCTGTGAAGGAGATCGAGAAGAACTTGATAGAGCTGCACCAAGTGTTCTTGGACATGGCGGCTCTGGTGGAATCTCAGGGCCAACAGCTCAACAACATAGAGAGCCACGTGGCGCATGCTAGCTCGTTCGTGAGGCGAGGCACAGAGCAGCTTGAGGAGGCCAAAGAGTATCAGAGCAACTCCAGGAAGTGGACCTGCATTGCCATACTTCTTGGCCTCCTTCTCATAATCGTGATATTGCTTCCTATCGTCATTCAAGTTCTACCTCTGTTGAGGTAG 912 0.5252 MNDLISGSFKRYTDVKEQVYMNDVEAGKESVNLDKFFEEVEDVKEDMRSVEKLYRKLQEANEESKIVHNSKTMKELRSRMDKDVEQVLKRVKIIKGKLEALEKSNAAQRQVPGCGPGSSADRTRTSIVSGLGKKLKDLMNDFQGLRARMQLEYKETVERRYFTITGEKADEDTIENLIASGESESFLQRAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNNIESHVAHASSFVRRGTEQLEEAKEYQSNSRKWTCIAILLGLLLIIVILLPIVIQVLPLLR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0797 303 Coils Coil 33 63 - -
Bisa07g0797 303 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 203 265 IPR000727 -
Bisa07g0797 303 Pfam Syntaxin 35 238 IPR006011 GO:0016020
Bisa07g0797 303 Coils Coil 84 104 - -
Bisa07g0797 303 CDD SNARE_syntaxin1-like 202 264 - -
Bisa07g0797 303 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 30 160 - -
Bisa07g0797 303 SMART tSNARE_6 198 265 IPR000727 -
Bisa07g0797 303 SUPERFAMILY t-snare proteins 32 258 IPR010989 GO:0016020|GO:0016192
Bisa07g0797 303 SMART SynN_4 28 154 IPR006011 GO:0016020
Bisa07g0797 303 FunFam Syntaxin 132 196 296 - -
Bisa07g0797 303 Pfam SNARE domain 240 291 IPR000727 -
Bisa07g0797 303 CDD SynN 33 190 IPR006011 GO:0016020
Bisa07g0797 303 Gene3D - 194 298 - -
Bisa07g0797 303 ProSitePatterns Syntaxin / epimorphin family signature. 209 248 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bisa07g0797 303 Gene3D - 33 160 - -
Bisa07g0797 303 PANTHER SYNTAXIN 36 287 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0797 Bisa-ChrBisa07 20789113 20790107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0797 1 303 SNARE and Associated Proteins AT1G61290 73.927 9.30e-173 478