Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0771 ATGGGAAGAGCACCTTGTTGTGACAAGAATGGCCTCAAGAAAGGACCTTGGACCCCCGAAGAAGACCAGAAGCTCATCCATTATATTCAGAAACATGGTTATGGCAACTGGAGAACACTCCCTAAGAATGCCGGGTTGCAGAGGTGCGGCAAGAGCTGCCGTCTCCGGTGGACCAACTATCTCCGACCAGATATCAAGCGTGGTCGCTTCTCTTTCGAAGAGGAAGAAGCAATCATTCAACTTCATAGCATTCTTGGAAACAAGTGGTCGGCGATAGCTTCTAGATTGCCGGGAAGAACAGACAACGAGATAAAGAACTATTGGAACACTCACATACGGAAGAGGCTTCTTCGGATGGGGATTGATCCGGTAACGCACAGTCCACGGCTGGACCTCCTGGACCTCTCTTCCATTCTGAGCAATTCCTCTCTGTATGCCACGTCATCAGCCTCCCAAATGAACACCAACATTCTCCTGAACCCAGAGCTTCTCAAGTTGGCTTCTTCCCTCATATCGTCCCAACGCAGAGATCATTATCACCATCATCATCAAAACCACATCAACTTCTGTACTGATCATAACAACCAAATCCCACAACACGGCTTTCTCCAAACCCAAGACCCTTCTCTTGTTCAAGAACTGCCTTTAACAATGGCGGATCATGAACCCAATGGGGATCCTTACCCTTCTTCGGAGTTCACACACTTTGGACATTGGCAAAGCGATGATAATGGAATGGCTTCTACTACTTCCACTTCTCTAACACAGGACTATGTTCCTTCAATATTACCACCAAGCTACCATTATTACAATACTTCTGATCAACAGCTTATGGTGGACCCTCACAGTAGCTTTGGCTTGGCATCAATGCTATCCACTCCTTCCAATTCAAATTCAACCTTTATCAATGGAGGAAGCAGCACGGAGGATGAGAGAGAGAGCTATAATAGCAGTAATATGTTGAAGTTTGAAATCCCGGACATTTTAGATGTTAATGACTTCATCTGTAATTAA 1014 0.4556 MGRAPCCDKNGLKKGPWTPEEDQKLIHYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDLSSILSNSSLYATSSASQMNTNILLNPELLKLASSLISSQRRDHYHHHHQNHINFCTDHNNQIPQHGFLQTQDPSLVQELPLTMADHEPNGDPYPSSEFTHFGHWQSDDNGMASTTSTSLTQDYVPSILPPSYHYYNTSDQQLMVDPHSSFGLASMLSTPSNSNSTFINGGSSTEDERESYNSSNMLKFEIPDILDVNDFICN 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0771 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Bisa07g0771 337 FunFam MYB-related transcription factor 13 66 - -
Bisa07g0771 337 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa07g0771 337 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa07g0771 337 CDD SANT 69 112 IPR001005 -
Bisa07g0771 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 238 - -
Bisa07g0771 337 CDD SANT 16 61 IPR001005 -
Bisa07g0771 337 SMART sant 13 63 IPR001005 -
Bisa07g0771 337 SMART sant 66 114 IPR001005 -
Bisa07g0771 337 FunFam Transcription factor MYB39 69 130 - -
Bisa07g0771 337 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa07g0771 337 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa07g0771 337 Gene3D - 13 66 - -
Bisa07g0771 337 Gene3D - 69 116 - -
Bisa07g0771 337 MobiDBLite consensus disorder prediction 296 315 - -
Bisa07g0771 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Bisa07g0771 337 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0771 Bisa-ChrBisa07 20186258 20187510 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0771 1 335 MYB Transcription Factor Family AT4G21440 54.670 4.74e-115 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa07g0771 Myb_DNA-binding 3.8e-16 CL0123