Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0767 ATGGGTGAGGAGGAAGCTTTACCGGACCATCTTCGCTGCAAGCGCACCGACGGGCGGCAATGGCGGTGCAGCCGGAGAGCGATGGACAACGTGAAGCTCTGTGAGATTCACTATCTCCAAGGCCGCCATCGGCAATACAAGGAGAAGGTCCCCGAATCGCTGAAGCTTCAGAGAAAGCGCAAGAAAGGGCTTAATAAGAACGATTCTGTTCTCAACAATGTTGAAGTGAGGGCACGGAAAGTCGGGAAAATGGCGAGGATGGTCAAGAAAAGGCTGAAAGTGTCAGATGATTCAGAATCAATTGATGCTCCTCTGAGGAAGAAGGCTTCCAAGCAAGGTGAAAAGCAGTTGGAGTTGATTAGGATGGTGCTGAAGAGTGAGGTTGAGAAGAGGAAGAAGAAGCAGGGAGAAAAAAAGGAGAGGAAGAAAATGGAGGAAGAGAATGAGTTGCATTACAGTGAGGGAAAGTTAACAAAAGAATTGCCCAATGGTGTAATGGCAATTTCTGGGGCGTCAACGCCCCAGGAATACTGCAATGTAGGTTCCCATTGTGATGTTAAATTATGTCTTGATGATCATAAAGCTATTACTCCACGTTACTTCAGGTCCAAGAATGTTGAGAGGTTTACTGTGGGCAAGTTGCAGGTTGTACCATATGGAGGAAACTTGAAGAAGGGTAAGAGGAAGAAGTGTCATTGGTGCCAGGGGAGCGATTCTTGGAATCTCATCAAATGTTCAAACTGTCAAAAGGAGTTTTTCTGCATGAACTGCATTAAAGAACGGTTTGTTAAATTCGTTTTCCTCAATTTGGAGTATATACTTGATCCTGTGTATGCTTATTTTCTAGTTTGCACTTTGCAGTGCATGGTGAACTTCTTGCTTCGTTGCCTTCCTTGTGTACAGGAGACTATTCGTGCTACAGTTCCAGAATTCCTTAGTGGTGAAGTTAAAGGCCCTGAGGGAAGGAACCATAAGGGAGCCTGCCACATCTTATTTTGATTTAGCAGCTTATTCCACTCTGCAAGTGCATTTTCAGTGCCCTATTGCCTCAAGGAATCTTTGGCTGGTAAAAGTAGAGTTGATAGAATACTGCATCTTCATTATTTGATCTGTAAAAGACCCTCTGATATTCACATCAAGCAGGTTGAATTTTGTGGCAATGACCAAAATTACTGAAACTCTTCTAATGCAATTAACTCATCCATATCCAAGTTATCTGATGGGATGAAAGCTTGTCTTGCCAGTGAAAACCTTCTTTTGGATAAGAAGGTCATTTCCAATGGCAATTCAGAGCTTGGTGGTGTATCTTGCCCTCCCACAGAGCTTGGTGGTTGTGGCGATAGCCTCCTTGAATTGAGATGTGTTTTTCCCTTAAATTGGATTAAAGACGTGGAAGTAAGAGCAGAAGAAATAGTTTGCTGCTATGACTTTCCTGAAACTTTGGATAAAAGTTTGAGCTGCTCGCTGTGTCTGGAAACAGATGATAAAATCAATGGATTGAAGCAGTTACAAGAAGCAGCTCTAAGAGAAGATTCAAATGATAATTGTTTGTTTTATCCCACTGTTTTGGACATCAATGGTGATAACTTTGAACATTTTCAGAAGCATTGGGGAAAAGGCCATCCTGTAGTCATGCGAGATGTGCTCCAAAGCGCATCAAACCTCTGTTGGGATCCACTGGTCATGTTCTGTGCCTATCTTGAGGGGAGCATTACAAGATATGAGAATGATAAGGACAAACTTGAAGCATGTCTGGATTGGTGTGAGGTAGAAATCAACATTAGGCAATACTTTACTGGATCTCTTAAATGTCAGCCACAAAAAAACATGTGGCATGACGTGCTGAAACTGAAGTGGTTGTTGTCTTCTCAACTATTCAAAGAACAGTTTCCAGCTCATTTTGCTGAAGTCATTGATGCTCTGCCACTTCAAGAATACATGAATCCCACATCTGGTCTTCTGAATGTAGCTGTAAACTTAAGGGCACAGGGAAGTGCAAATCATGACCTAGGGCCATATGTCTACCTTTCATATGGCTGTGGTGATGAACAAAGTAATTTTGTGACAAAACTCTCTTATGACTCATATGATGTGGTTAATATTTTGGCACATACAACAGATGCCCCTCTCTCTACAGGACAGCTAACTAAAATAAGTAAGTTACTGAAAAAGCACCAAACTGTGTGTGAAAGGGAGTCCTCCAAAATAACTGCTGAGCAATTAAAGGAACAGAGGGACAAAGAAAATTCGTTACTGCTTTCTGAAGACATTGCAAAAACAGGGTTGCATAGTGTGGGGAGAGAAGAAATGCACTTCTTCAGGAGAGTCAATAGAATAGCATGCATCTCTACTGAAGCAAAAAAAGCAGCTAATCTGAGTATGCAATGCAAAATTTCTCAGAATGGAGAATGTGATTCAGATTTAGATTCTGATTCTGATTCTGAACCCACTTTACTTCACCATGGAAATGTTCAAAACACTAGAGTTTCTCCACATAATAATTGTAGACCCTTTGGAGGCTCAAATAATGACAGAAATAAAAAGTTTGATAAATGTTCCAGTGCCCAGTGGGATGTTTTTCGAAGACAAGATGTTCCAAAGCTCATAGAATACCTTAAAAGACACTCGGATGAATTTTCTCATTCCCATGACTATCACAAGCAGATGGTCCATCCACTTTTAGATCAGAGCTTCTTTCTTGATAATACTCAGAAAATGAGGCTCAAGGAGGAATTTAAAATTGAACCGTGGACTTTTGAGCAACACGTTGGTGAAGCCGTCATCATTCCTGCTGGGTGTCCTTATCAAATTAGAAACTCTAAGTGTTGTGTTCATGTAGTATTGGAATTTGTGTCCCCTGAGAATGCTACTGAGTGTGTCCAGTTGATCGAAGAAGTCCATCTGCTTCCTGAAGATCATACAGCGAAAGCAGACCATCTTCAGGTGAAGAAAATGGCACTTCATAGCATGAATTCAGCAATAAAAGAGATACGGGAGCTTACCAGCAAAATGTGA 3015 0.4149 MGEEEALPDHLRCKRTDGRQWRCSRRAMDNVKLCEIHYLQGRHRQYKEKVPESLKLQRKRKKGLNKNDSVLNNVEVRARKVGKMARMVKKRLKVSDDSESIDAPLRKKASKQGEKQLELIRMVLKSEVEKRKKKQGEKKERKKMEEENELHYSEGKLTKELPNGVMAISGASTPQEYCNVGSHCDVKLCLDDHKAITPRYFRSKNVERFTVGKLQVVPYGGNLKKGKRKKCHWCQGSDSWNLIKCSNCQKEFFCMNCIKERFVKFVFLNLEYILDPVYAYFLVCTLQCMVNFLLRCLPCVQETIRATVPEFLSGEVKGPEGRNHKGACHILFXFSSLFHSASAFSVPYCLKESLAGKSRVDRILHLHYLICKRPSDIHIKQVEFCGNDQNYXNSSNAINSSISKLSDGMKACLASENLLLDKKVISNGNSELGGVSCPPTELGGCGDSLLELRCVFPLNWIKDVEVRAEEIVCCYDFPETLDKSLSCSLCLETDDKINGLKQLQEAALREDSNDNCLFYPTVLDINGDNFEHFQKHWGKGHPVVMRDVLQSASNLCWDPLVMFCAYLEGSITRYENDKDKLEACLDWCEVEINIRQYFTGSLKCQPQKNMWHDVLKLKWLLSSQLFKEQFPAHFAEVIDALPLQEYMNPTSGLLNVAVNLRAQGSANHDLGPYVYLSYGCGDEQSNFVTKLSYDSYDVVNILAHTTDAPLSTGQLTKISKLLKKHQTVCERESSKITAEQLKEQRDKENSLLLSEDIAKTGLHSVGREEMHFFRRVNRIACISTEAKKAANLSMQCKISQNGECDSDLDSDSDSEPTLLHHGNVQNTRVSPHNNCRPFGGSNNDRNKKFDKCSSAQWDVFRRQDVPKLIEYLKRHSDEFSHSHDYHKQMVHPLLDQSFFLDNTQKMRLKEEFKIEPWTFEQHVGEAVIIPAGCPYQIRNSKCCVHVVLEFVSPENATECVQLIEEVHLLPEDHTAKADHLQVKKMALHSMNSAIKEIRELTSKM 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0767 1004 Pfam WRC 8 49 IPR014977 -
Bisa07g0767 1004 Gene3D Cupin 521 976 - -
Bisa07g0767 1004 ProSiteProfiles JmjC domain profile. 645 967 IPR003347 -
Bisa07g0767 1004 Coils Coil 127 154 - -
Bisa07g0767 1004 MobiDBLite consensus disorder prediction 805 842 - -
Bisa07g0767 1004 ProSiteProfiles WRC domain profile. 7 53 IPR014977 -
Bisa07g0767 1004 SMART cupin_9 630 967 IPR003347 -
Bisa07g0767 1004 Coils Coil 990 1004 - -
Bisa07g0767 1004 MobiDBLite consensus disorder prediction 817 841 - -
Bisa07g0767 1004 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 429 1002 IPR045109 GO:0032454|GO:0033169
Bisa07g0767 1004 MobiDBLite consensus disorder prediction 130 153 - -
Bisa07g0767 1004 SUPERFAMILY Clavaminate synthase-like 529 991 - -
Bisa07g0767 1004 Pfam JmjC domain, hydroxylase 852 948 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0767 Bisa-ChrBisa07 20138921 20144198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0767 8 47 GRF Transcription Factor Family AT2G22840 55.000 5.23e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa07g0767 JmjC 7.6e-11 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0767 07 20138921 20144198 Bisa07g0767 07 20138921 20144198 CCT