Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0751 ATGGATTGCCTTTCAAAGTTCACTGATCTGCCTGGATATAGAGAATTATATTTGGAAGTTTTAGTTGGTTATATGAGAGAGAAGGTTAGAGAGAGAAAGAGTGAGCGTTTGATAGCAATGGCGATGTCTCAGCTCCCGGACCACTTCAAGTGTCCGATTTCCCTTGAGATAATGTCCGACCCGGTCATCCTGTCCTCGGGTCACACCTTCGACCGCGCCTCCATCCAACGGTGGCTCGACGCCGGTCACCGGATTTGTCCAATTACCAAATTGCCCCTCCCTGATTACCCGTCCCTCATCCCCAACCATGCTCTCAGAAGCTTGATTTCTAACTACGCCCTCATTTCTCCTCTGAAGCAGCAGCCTCCTCCCCAACCTGAAACCCTAATCTCCATGCTCACCTCTCGGTCTTCTACCGTGGACTCTAAAATTGAATTGCTTGACCAGCTCACCCGGCTTTCGAAGCGTGACTCGGTGTTTCGCCGGCGGTTGACTGAGTCAGGGGTCGTGTCGGCGGTGTTGAACTGTGTTGACTCCGGTGATTCTGGTCTTCAGGAGAAAGCCCTCTCCCTGCTGTTGAATCTGAGTCTTGACGATGATAACAAGGTGGGTTTGGTGGCGGAAGGCGCGATAGGTCGAGTTGTGGCAGTTCTGCTCGGTGGCTCCCCGGATTGCCGAGCGGTGGCGGCAACTATGCTGACGAGCTTGGCGGTTGTGGAAGTAAATAAAGCCACAATTGGTGCGTACCCATATGCGATTGGAGCTCTGGTTTCGCTTCTTCGGAATGGTAAAGGGAGAGAGAAGAAGGAAGCGGCCACAGCGCTTTATGCCATATGTTCTTTTCCTGATAATCGAAGGAGGGCCGTAGAGTGCGGCGCGGTGCCCATTTTGCTCAGAACTGCTGATTCTGGGCTTGAAAGGGCTGTTGAGGTTCTGGGTATTCTGGCTAAGTGTAAGGAAGGTAGGGAGCAAATGGAAAGCTATCATGGATGTATACAGATTCTAGCTCGGGTTTTGAGGAATGGAAGCTCGAGGGGAGTTCAGTATGCGCTGTTGGCATTGAACTCCCTTTGTTGTAACAATGAAGAAAGGCGTTTAGAGGCGACGAAAGAAGGAGTTTTGGAGATATGTCTTGCATTGCTGGATGATGATAACGAAAAAGTAAGGAGAAACTCATCCAGTTTGATTCAGGTTCTGCGTGGAAACCAGTGGATGAGTTGA 1221 0.5045 MDCLSKFTDLPGYRELYLEVLVGYMREKVRERKSERLIAMAMSQLPDHFKCPISLEIMSDPVILSSGHTFDRASIQRWLDAGHRICPITKLPLPDYPSLIPNHALRSLISNYALISPLKQQPPPQPETLISMLTSRSSTVDSKIELLDQLTRLSKRDSVFRRRLTESGVVSAVLNCVDSGDSGLQEKALSLLLNLSLDDDNKVGLVAEGAIGRVVAVLLGGSPDCRAVAATMLTSLAVVEVNKATIGAYPYAIGALVSLLRNGKGREKKEAATALYAICSFPDNRRRAVECGAVPILLRTADSGLERAVEVLGILAKCKEGREQMESYHGCIQILARVLRNGSSRGVQYALLALNSLCCNNEERRLEATKEGVLEICLALLDDDNEKVRRNSSSLIQVLRGNQWMS 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0751 406 SUPERFAMILY RING/U-box 41 114 - -
Bisa07g0751 406 SUPERFAMILY ARM repeat 127 399 IPR016024 -
Bisa07g0751 406 Gene3D - 305 403 IPR011989 -
Bisa07g0751 406 Gene3D - 126 304 IPR011989 -
Bisa07g0751 406 PANTHER U BOX DOMAIN-CONTAINING 32 397 - -
Bisa07g0751 406 ProSiteProfiles U-box domain profile. 44 119 IPR003613 GO:0004842|GO:0016567
Bisa07g0751 406 Pfam U-box domain 46 112 IPR003613 GO:0004842|GO:0016567
Bisa07g0751 406 SMART arm_5 157 197 IPR000225 GO:0005515
Bisa07g0751 406 SMART arm_5 198 238 IPR000225 GO:0005515
Bisa07g0751 406 SMART arm_5 361 401 IPR000225 GO:0005515
Bisa07g0751 406 SMART arm_5 318 359 IPR000225 GO:0005515
Bisa07g0751 406 SMART arm_5 281 317 IPR000225 GO:0005515
Bisa07g0751 406 CDD RING-Ubox_PUB 46 95 IPR045210 -
Bisa07g0751 406 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 38 114 IPR013083 -
Bisa07g0751 406 FunFam RING-type E3 ubiquitin transferase 44 116 - -
Bisa07g0751 406 SMART Ubox_2 48 112 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0751 Bisa-ChrBisa07 19754929 19756631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0751 45 401 U-box Gene Family AT4G21350 63.115 1.30e-155 442