Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0730 ATGGGTTCTCCGGAAAACCCTAACTGGTCGTTCGATTACGGTTATTTAGATGACATTCCTGTCCTCGGCGGTGACCTTCCATCCCTCGACCCTCCCAATTTCTCTTGGCCCTCTCATTCCCTGACTGCTCCTCCGCCTGATTTCAGTGTGGAGTTAGATGACTCGTGTGGGAATCCAGATGTTTTTAAGGAAACTGGGTCTAGCAAACGCCTAAGGTCAGAATCCAGCAATTCATCTGGTTCCAAAGCATGTAGAGAGAAAATGCGAAGGGATCGATTGAATGACAGGTTCCTGGAATTGGGCTCTATCCTTGATCCTGGCAAACCTGCCAAAGCAGACAAGGCTGTCATATTAAGCGATGCAGTTCGGGTGCTCTCTCAGCTACGGGACGAGGCTCAGAAGCTTAAAGAGTCCAATGAGAATCTGCAGGAGAAAATAAACGAATTGAAGGCTGAGAAGACCGAGCTCCGTGATGAGAAGCAGCGACTAAAACTAGAGAAAGATAAAATCAAGCAGCAAGTTAAAGCCTTGAATTCACAACCAAGCTTTTTGCCTCACCCTCCAACCCTCCCAGCTGCATTTCCTGCACCAGGACAAGTTCTCAGCAGGAAGATGGTACCATTCGTTGGCTACCCAGGAGTTTCTATGTGGCAGTTCCTGCCTCCTGCTGCTGTTGATACCTCTCAGGACCATGTTCTTCGTCCCCCAGTTGCATAA 717 0.4868 MGSPENPNWSFDYGYLDDIPVLGGDLPSLDPPNFSWPSHSLTAPPPDFSVELDDSCGNPDVFKETGSSKRLRSESSNSSGSKACREKMRRDRLNDRFLELGSILDPGKPAKADKAVILSDAVRVLSQLRDEAQKLKESNENLQEKINELKAEKTELRDEKQRLKLEKDKIKQQVKALNSQPSFLPHPPTLPAAFPAPGQVLSRKMVPFVGYPGVSMWQFLPPAAVDTSQDHVLRPPVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0730 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 77 128 IPR011598 GO:0046983
Bisa07g0730 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 149 IPR036638 GO:0046983
Bisa07g0730 238 Pfam Helix-loop-helix DNA-binding domain 81 128 IPR011598 GO:0046983
Bisa07g0730 238 CDD bHLH_AtILR3_like 82 157 - -
Bisa07g0730 238 PANTHER BHLH TRANSCRIPTION FACTOR 6 238 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Bisa07g0730 238 SMART finulus 83 134 IPR011598 GO:0046983
Bisa07g0730 238 MobiDBLite consensus disorder prediction 27 88 - -
Bisa07g0730 238 Coils Coil 118 180 - -
Bisa07g0730 238 Gene3D - 81 157 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0730 Bisa-ChrBisa07 19056431 19059039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0730 1 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 58.367 5.88e-94 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g0730 HLH 4e-10 No_clan