Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0707 ATGTTACCTGAACTGGGAATAATGGAGGATCCTACCTTTCTTCACCAATGGCACTTGGGCTCTCTTGAAGATCCTACCTTACTGCCACTAGCTGCTGCTTTTGGAGAGACCTTGCAAGAACATTCATTCTCCAATCCAACTTTCAACCCCAAAACTTCCATGGAAACCACAATTAGTTCCATTGAAAGACCACAGAAGCAGCTTAAACCCAACCATTGGAGTCCCAACAGAAGTGATCAGACTCGGACATTGGACACAGGCTATGATTCTTATCCCAATCTTCTTTCCTTTGTCAACTCAAATTACATAAGCCAATTGGGAGCATTGAAGCCTAAGGAGGAGATAGTATGTCCTAAAGTCAACACTACAATTCCTTCAGACATGTTCTCTCATGGATCCTTGGGAGACCAAGCCTATGTCTTCAAGGGAAGCCAAGATTCAAGAAAGATTGGGACAAACTCTAAAATTTCTCAACCTCAAGACCACATAATCGCTGAAAGGAAGCGACGAGAGAAGCTGAGTCAGCGGTTCATTGCTCTTTCTGCTCTTGTCCCTGGCCTAAAGAAGACGGACAAGGCCTCTGTTCTTGGAGATGCTATAAAGTACTTGAAGCAATTGCAAGAGAAAGTGAAATCCCTTGAAGAGGAACAGAAAAGAAAGAAAACTGTGGAATCTGTGGTGATTGTGAAGAAATCTCAAGTATTTGCTGATGAAGCAGCAGGCGTCTGTTCTTCAGATTCTGTTGGTCCCTTTGATGAGCCACTTCCTGAAATTGAAGCTAGATTTTGTGAAAGAAACGTTCTCATAAGAGTTCACTGTGAGAAAAGGACCGGAGTGATAGAAAAAACAATGAGTGAGATTGAGAAACTCCATCTTATAATCACCAGTAGCAGTGTCATGACATTTGGGAGTTCTGTTCTTGATATAACAATAATTGCTCAGATGGATATGGAATTTGGCATGACAGTGAAGGATCTTGTGAAATGCCTACGCTCAGCTTTTGGATCTTTCATGTGA 1017 0.4208 MLPELGIMEDPTFLHQWHLGSLEDPTLLPLAAAFGETLQEHSFSNPTFNPKTSMETTISSIERPQKQLKPNHWSPNRSDQTRTLDTGYDSYPNLLSFVNSNYISQLGALKPKEEIVCPKVNTTIPSDMFSHGSLGDQAYVFKGSQDSRKIGTNSKISQPQDHIIAERKRREKLSQRFIALSALVPGLKKTDKASVLGDAIKYLKQLQEKVKSLEEEQKRKKTVESVVIVKKSQVFADEAAGVCSSDSVGPFDEPLPEIEARFCERNVLIRVHCEKRTGVIEKTMSEIEKLHLIITSSSVMTFGSSVLDITIIAQMDMEFGMTVKDLVKCLRSAFGSFM 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0707 338 Pfam Helix-loop-helix DNA-binding domain 160 207 IPR011598 GO:0046983
Bisa07g0707 338 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 161 219 IPR036638 GO:0046983
Bisa07g0707 338 Coils Coil 196 223 - -
Bisa07g0707 338 CDD bHLH_AtNAI1_like 160 232 - -
Bisa07g0707 338 MobiDBLite consensus disorder prediction 63 85 - -
Bisa07g0707 338 Gene3D - 155 229 IPR036638 GO:0046983
Bisa07g0707 338 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Bisa07g0707 338 PANTHER BHLH TRANSCRIPTION FACTOR 35 334 - -
Bisa07g0707 338 SMART finulus 163 212 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0707 Bisa-ChrBisa07 18594933 18598099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0707 142 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 56.061 1.64e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa07g0707 HLH 2.3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0707 07 18594933 18598099 Bisa07g0707 07 18594933 18598099 CCT
Bisa07g0707 07 18594933 18598099 Bisa07g0707 07 18594933 18598099 ECH