LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa07g0702	ATGGAGATCTTTGACGATGTGTGGATAGAGTACATACCCTACGACGATGTCATTGCAAACGGATATGATTACGATGCAGATGTGTGGGTACCAAAGATGTCAGAGTTATATGATATGGAAATCACAAATGGGTTCAACAAAGTGAGAAATAATTGTGTTCAAATAAGCTTGCAGAGGAAGGATTTGTTGGAATGTGGGATTTCATTGCTGCTTGGTGAGAGCATTAGCACTATGCTGGAGTCACTGGCTTATTGCCAAAGCTTTAAGGGTTATGGCATTACCAAACACAAGAATTTGGCCTTGCCTCAAGCTATTTCACGGATTTGTAGAAGTTCTGTTTTCATGCTATATTCGTATAACAAGCAAGTTGCACTACTATCACACAGTATTACACATAAGACTTCTATGCCGGAAATTTTCTTTGAAGGCACACCTTTTGTTGCAACCACATTCCCTGATTGCAAAGGAATCTATTTCTCAAAGAATAGGCAATTGCACTGGGAAAGGTTCCGGGCAAGCGCTGCATATGATGTTGCCGATGCTGTTGAAGTCATCAACGATTTAGGATTAGACACCCTTACATTCTTGGCTGTGACTGTGTTAATTGTGCCCACATTCAAGTTAATGAGAGCCAGTCCTATACTTGGTTTCTTCTTTGCTGGAGTGGTACTCAATCAGTTTGGGTTGATAAGAAACATCACAGATGTGAAAATTCTGTCTGAATGGGGCATCCTTTTCTTGCTGTTTGAGATGGGTTTGGAGCTTTCACTTGCACGTCTGAAGGCTCTTGCTAAATATGCCTTTGGAATGGGATTGGCTCAGGTTGTATTATCCACTCTAGCATTTACTGCTTTTGAACTTCCACCTAATGGGGCTATTGGAACAAAAATTTTGGAGTTCCTTTTCCACTCAAGGCCTGATCTGGTAAACATAAGAAGCATTGATGAAGCTGTAGTGATTGGTGCTGCTCTTTCCCTGTCTTCTTCTGCATTTGTTTTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGATTCGGTTCAGCAACTCTGGGAATTCTACTTTTGCAGGACATAGCTGTTGTCCCTCTTTTAGTCATTCTTCCGATACTGGAGAGCCAGAATCTGGCTCAGGACAGCATTTGGCCAATACTTGCTCAGGAAAGTTTAAAGGCATTAGGTGGATTGGGACTGCTTTCTCTTGGGGGAAAATACATTCTTAGAAGAGTATTTGAGGTTGTTGCAGATGCAAGGAGCTCAGAAGCTTTTGTTGCTCTTTGCTTGCTGACCATTGCTGGGACTTCACTTGTTACACAGAAGTTGGGCTTTAGTGATACACTTGGAGCATTTTTAGCTGGGGCACTCTTAGCAGAAACAAATTTCAGGACACAGATTGAAGCAGATATAAGACCATTTAGAGGCCTACTTCTTGGGTTATTTTTTCTAACTACCGGAACTTCCATTGACCTCCAGCTTCTTTCCCGAGAGTGGCCAAATGTACTTTCACTCTTGGCAGGTTTAATTGTCATCAAGACATTGATTATTACGGCTATAGGTCCACGTGTTGGACTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGCGAGTTTGGATTTGTGGTTTTCTCTTTAGCAAATCAGCTTGGGGTGCTGCCTCTTGAGCTCAACAAGCTGCTCATAATTGTTGTTGTATTGTCAATGGCGTTAACCCCACTTCTTAATGAAGCTGGACGAAGAGCTGCTGGTTTTATTGATGACAAATTTGATGCTGAAAATAAACCTTCTGAGAGGGCTGATTTCAATGCCAGTGAACCTGTTGTTATCCTTGGATTTGGACAGATGGGCCAGGTCCTTGCCAATTTCCTCTCCAACCCATTGGCTTCAGGAGGAGATAGTGATGCTGTAGGATGGCCTTACATAGCTTTTGATCTTGACCCCAGAGCGGTAAAGGCAGCTAGAAACCTCGGGTTTCCAATTCTATATGGGGATGGATCACGCCCAGCTGTTCTTCAATCTGCTGGTATCTCTTCTCCAAAAGCTGTCATGGTTATGTACACTGGGAAGGAAAAAACAATTGAAGCTGTTCAAAGGCTACGGTTCACTTTCCCTGCAATTCCAATCTATGCTAGAGCTCAGGATCTCAAGCATCTTTTAGATCTGAAGAAAGCAGGTGCAACAGATACCATTTTGGAAGATGCAGAGACTAGCTTACAGCTGGGTTCTAAGCTTCTGAAAGGCCTAGGTGTGATGTCTGATGATGTAGCATTTCTGAGTCAGCTCATTCGAGATTCCATGGAACTACAAGCTCAAGAAGCACTCAGCCAGTCTGAGTACCGTGAATTTGATGTGATGGAACCACTTCAGGTGAAAGTTGGTGATTTGATTGAGTCAAGTGAACCTATGGCAACAACTTCACCAGAGTTCGAATTACCGGAGCTGAACCAGACAGATGAAGCTTTGTTGGCTAGAATCCATACAGAAGTAGATTCTGATGAACAAGATTATGAACTAAATCAAGCTGTGACTTTAGAACGAAATGGTGTTCTATATAGCAAACAAGTTTCTGAGGAAAGCTCAGTGGCTGGATACCCAGATGATTTAGGAGAGAAGAATCTGGTAGACCCATCAACCCGTTACCGTACAAGCATGGAGGAACCCTAG	2676	0.4264	MEIFDDVWIEYIPYDDVIANGYDYDADVWVPKMSELYDMEITNGFNKVRNNCVQISLQRKDLLECGISLLLGESISTMLESLAYCQSFKGYGITKHKNLALPQAISRICRSSVFMLYSYNKQVALLSHSITHKTSMPEIFFEGTPFVATTFPDCKGIYFSKNRQLHWERFRASAAYDVADAVEVINDLGLDTLTFLAVTVLIVPTFKLMRASPILGFFFAGVVLNQFGLIRNITDVKILSEWGILFLLFEMGLELSLARLKALAKYAFGMGLAQVVLSTLAFTAFELPPNGAIGTKILEFLFHSRPDLVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLAQDSIWPILAQESLKALGGLGLLSLGGKYILRRVFEVVADARSSEAFVALCLLTIAGTSLVTQKLGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDLQLLSREWPNVLSLLAGLIVIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANQLGVLPLELNKLLIIVVVLSMALTPLLNEAGRRAAGFIDDKFDAENKPSERADFNASEPVVILGFGQMGQVLANFLSNPLASGGDSDAVGWPYIAFDLDPRAVKAARNLGFPILYGDGSRPAVLQSAGISSPKAVMVMYTGKEKTIEAVQRLRFTFPAIPIYARAQDLKHLLDLKKAGATDTILEDAETSLQLGSKLLKGLGVMSDDVAFLSQLIRDSMELQAQEALSQSEYREFDVMEPLQVKVGDLIESSEPMATTSPEFELPELNQTDEALLARIHTEVDSDEQDYELNQAVTLERNGVLYSKQVSEESSVAGYPDDLGEKNLVDPSTRYRTSMEEP	891

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa07g0702	891	Gene3D	-	187	585	IPR038770	-
	Bisa07g0702	891	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	162	800	-	-
	Bisa07g0702	891	ProSiteProfiles	RCK N-terminal domain profile.	610	742	IPR003148	GO:0006813
	Bisa07g0702	891	Gene3D	-	610	780	-	-
	Bisa07g0702	891	FunFam	K(+) efflux antiporter 3, chloroplastic	187	586	-	-
	Bisa07g0702	891	MobiDBLite	consensus disorder prediction	861	891	-	-
	Bisa07g0702	891	Pfam	Sodium/hydrogen exchanger family	194	579	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Bisa07g0702	891	Pfam	TrkA-N domain	611	734	IPR003148	GO:0006813
	Bisa07g0702	891	FunFam	Glutathione-regulated potassium-efflux system protein KefB	608	780	-	-
	Bisa07g0702	891	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	609	753	IPR036291	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa07g0702	Bisa-ChrBisa07	18409346	18438236	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa07g0702	74	799	Inorganic Solute Cotransporters	AT4G04850	72.640	0.0	999