Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0665 ATGCTGGTGGATGAGGTCGAAGGTGGATTGCACGCGCAGTATGCTGAAGGTCGTGACGAGGTCAATGCCGCGGTGGAAGAAGCTCGAGTAAGTTCTGGGTTTTCTGGAGCTAATGGTTCTGCTGTGCAGTCTCGAACCAGTGAGCTCACCATTGCGTTTGAAGGCGAAGTCTATGTTTTCCCGGCGGTTACACCTGAGAAGGTTCAAGCTGTATTGTTACTTTTGGGAGGTTGTGATATGCCTAATAATGCCCCCTGCACTGAATTTTTGTTGCAACATAACAGTCAGAACTTCATGGGAATAATTGATGCTTCCCGAGGCTCAAAGCTTTCGCGGAGAACGGCATCCCTTGTTAGGTTCCGTGAAAAGCGGAAAGAGAGATGCTTTGACAAGAAAATTCGTTATAATTGTCGTAAAGAGGTTGCTCAAAGGATGCATCGTAAGAATGGACAGTTTGCATCATTGAAGGAATGCTTCAAATCGGCTGCTGAAAAAAGTGATCCAAGCAATGCTGCTGCTTGTCCAGAACTTACTGAACGGAGATGCCAGCATTGTGGAATAGGTGAGAACTCTACTCCAGCTATGCGTCGAGGACCAGCTGGTCCAAGATCTCTGTGCAATGCTTGTGGGCTTATGTGGGCAAATAAGGGAACCCTTAGAGATCTCAGCAAAGCAGGGAAAATCACTTCTCTTGAGCAAAATGGACTGGATACTTCAGCTGATATAAAGCCTTCCACAACTGAACGCGAAAGTTCTTGTCCTGACCAGGATGATATGGGAAGCCCAGAGGAGTCTAAACCTGTACCATTAGATTCCAGTCAATCACCCAGGAAGACAAATGAGCAGTATATGTCTGAAGCTGCTGAAGCAGTTACTGACAACTTGTCCATCCAGGTGGAGAATCCCACTGATCTGCATGAGCAGGATACACTTGAGGATATTGCTGATGCATCCGGAACAGAATTCGAGATTCCTGCAGGTTTTGATGAGCAGGTTGACATTGATGATTCAAACATGAGGACTTACTGGTTTTGA 1035 0.4628 MLVDEVEGGLHAQYAEGRDEVNAAVEEARVSSGFSGANGSAVQSRTSELTIAFEGEVYVFPAVTPEKVQAVLLLLGGCDMPNNAPCTEFLLQHNSQNFMGIIDASRGSKLSRRTASLVRFREKRKERCFDKKIRYNCRKEVAQRMHRKNGQFASLKECFKSAAEKSDPSNAAACPELTERRCQHCGIGENSTPAMRRGPAGPRSLCNACGLMWANKGTLRDLSKAGKITSLEQNGLDTSADIKPSTTERESSCPDQDDMGSPEESKPVPLDSSQSPRKTNEQYMSEAAEAVTDNLSIQVENPTDLHEQDTLEDIADASGTEFEIPAGFDEQVDIDDSNMRTYWF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0665 344 MobiDBLite consensus disorder prediction 233 283 - -
Bisa07g0665 344 Pfam CCT motif 113 154 IPR010402 GO:0005515
Bisa07g0665 344 SMART tify_2 42 77 IPR010399 -
Bisa07g0665 344 MobiDBLite consensus disorder prediction 233 247 - -
Bisa07g0665 344 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 179 230 - -
Bisa07g0665 344 ProSiteProfiles Tify domain profile. 42 77 IPR010399 -
Bisa07g0665 344 MobiDBLite consensus disorder prediction 248 264 - -
Bisa07g0665 344 Gene3D - 176 234 IPR013088 GO:0006355|GO:0008270
Bisa07g0665 344 ProSitePatterns GATA-type zinc finger domain. 182 209 IPR000679 GO:0006355|GO:0043565
Bisa07g0665 344 Pfam GATA zinc finger 182 218 IPR000679 GO:0006355|GO:0043565
Bisa07g0665 344 MobiDBLite consensus disorder prediction 267 283 - -
Bisa07g0665 344 Pfam tify domain 44 76 IPR010399 -
Bisa07g0665 344 CDD ZnF_GATA 181 224 IPR000679 GO:0006355|GO:0043565
Bisa07g0665 344 ProSiteProfiles CCT domain profile. 113 155 IPR010402 GO:0005515
Bisa07g0665 344 PANTHER GATA TRANSCRIPTION FACTOR 28 16 323 IPR045280 GO:0006355
Bisa07g0665 344 SMART GATA_3 176 229 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0665 Bisa-ChrBisa07 17299921 17308131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0665 48 230 Tify Gene Family AT1G51600 55.263 3.13e-60 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa07g0665 CCT 1.2e-14 CL0281