Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0619 ATGAGCTTCTTTCTGAAAAGTGATGGTGAAACACAGAGTGGGTCTTCAAGGCATGGCCAAGTGAGAAGCTTGGAAATGAAGGAAGAGAGGAGTGAGGGGGTTGTTGCAGAAGCAGAAGAAGAAGAGGGTGTTTGTGTGACATGGGAGGATTTGTGGGTGACAGTGCCAAGTTGGAAAGATGGGTCCAAAACCATTCTTGAGGGTCTCACAGGTTATGCCAAGCCAGGCCAGCTCTTGGCCATTATGGGTGCTTCTGGTTGTGGCAAGTCCACTCTTCTTGATGCCTTAGCAGGTAGGTTGTCTACAAAGGCAAAGCAGACAGGACATATTCTAATCAATGGCCACAAACAAGCACTAGCTTATGGAACATCAGCATATCTGACACAAGATGATGCAATATTGACCACCCTTACAGTCAGAGAAGCAGTGTACTACTCAGCTCAGCTCCAACTTCCTGATTCAATGTCAAAGTCAGAGAAGCAGGAGAGAGCAGACTGCACAATCAGAGAGATGGGCCTTCAACATGCCATTAACACAAGAATTGGAGGGTGTGGCTCTAAAGGCATCAGTGGGGGTCAAAAGAGGAGGGTTAGCATCTGCATTGAGATCCTCACAAGGCCTAGACTTCTATTCCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCTTCTTACTATGTCATGAGCAGAATTGCAAGCCTGAATCAAATGGATGGCATTCAGAGGACTATTATTGCATCAATCCATCAGCCTAGCAGTGAGGTTTTTCAGCTTTTTGACAGCCTTTTCCTTCTGTCTTCTGGTCAAGCAGTGTACTTTGGCCCTGCTTCTGCTGCAAATGAGTTTTTTGCATCAACTGGTTTTCCTTGCCCGACTCTCCAGAACCCTTCTGAACATTTTGTAAAAACTATCAACAAGGATTTTGAGCAGGAGAACCCTAAGCAAGGACTATCTACAGGACTAGCCACGGAAAAAGCTATTCATATCCTTGTGCAATCATACAAGTCATCTGCAATCAGTCACCAAGTTCAAACAGAAGTAGCTAAAATAAGAAAAAGGAACTCTAGTGCAATGGAGATGAAAAGTCACGCTCCCTTCTTCAAACAGTGCAACATTCTTACAAGAAGATCATTTGTTAATATGTATCGCGATGTAGGCTACTACTGGTTACGTCTACTTATTTACGGTGGATTGGCTATAAGTGTTGGTACCATCTTCTACAATATTGGGTCAAGCAATGGATCTATTCAGGTATTTGAAAGAGAGAGACTAAACGGGCATTATGGTGTTACTGCATACACCATTGGACACACATTCTCTTCTGTTCCATACTTGCTATTGATGTCACTGATTCCAGGAGGACTTGTTTATTACCTAACTGGACTTCACCAAGGATGTCAGCACTTTCTGTACTTCATTTCTGTGCTCTTTGTTTCTGTAATGTTGGTTGAAAGCCTTATGATGATTGTTACAATTATGGCCCCCAACTTCTTGATGGGAATAATCACTGGTTCTGGCATTCTGGGAGTTATGATGCTAACCGCTGGATTCTATCGCCTACCGGCGGATCTTCCGAAACTCCCTTGGAGATACCCACTATACTACATTTCTATTCACAAGTATGCCTACCAAGGATTGTTCAAGAATGAGTTTGAAGGTCTGATATTTACTAACAACCAAGTTGGGGGGCCTAGGATCATTAGTGGTGAAGAAATGCTGAGAAATTCTTGGCAGATTGAAGTGGATCACTCAAAGTGGTTTGAGCTTTCCATCTTGCTAGGAATGGTAGTTCTGTATAGAATTCTGTTCTTGGCTATCATCAAGAGCATTGAGAAGGTGAAGCCTATTGTTGCAGCCTTTAAGTGA 1866 0.433 MSFFLKSDGETQSGSSRHGQVRSLEMKEERSEGVVAEAEEEEGVCVTWEDLWVTVPSWKDGSKTILEGLTGYAKPGQLLAIMGASGCGKSTLLDALAGRLSTKAKQTGHILINGHKQALAYGTSAYLTQDDAILTTLTVREAVYYSAQLQLPDSMSKSEKQERADCTIREMGLQHAINTRIGGCGSKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMSRIASLNQMDGIQRTIIASIHQPSSEVFQLFDSLFLLSSGQAVYFGPASAANEFFASTGFPCPTLQNPSEHFVKTINKDFEQENPKQGLSTGLATEKAIHILVQSYKSSAISHQVQTEVAKIRKRNSSAMEMKSHAPFFKQCNILTRRSFVNMYRDVGYYWLRLLIYGGLAISVGTIFYNIGSSNGSIQVFERERLNGHYGVTAYTIGHTFSSVPYLLLMSLIPGGLVYYLTGLHQGCQHFLYFISVLFVSVMLVESLMMIVTIMAPNFLMGIITGSGILGVMMLTAGFYRLPADLPKLPWRYPLYYISIHKYAYQGLFKNEFEGLIFTNNQVGGPRIISGEEMLRNSWQIEVDHSKWFELSILLGMVVLYRILFLAIIKSIEKVKPIVAAFK 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0619 621 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524|GO:0016887
Bisa07g0619 621 MobiDBLite consensus disorder prediction 1 20 - -
Bisa07g0619 621 Coils Coil 21 41 - -
Bisa07g0619 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 283 IPR027417 -
Bisa07g0619 621 Pfam ABC-2 type transporter 249 353 IPR043926 GO:0140359
Bisa07g0619 621 CDD ABCG_EPDR 46 274 - -
Bisa07g0619 621 Pfam ABC transporter 68 217 IPR003439 GO:0005524
Bisa07g0619 621 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 292 IPR003439 GO:0005524
Bisa07g0619 621 MobiDBLite consensus disorder prediction 1 38 - -
Bisa07g0619 621 FunFam ABC transporter G family member 11 44 333 - -
Bisa07g0619 621 Gene3D - 45 325 IPR027417 -
Bisa07g0619 621 Pfam ABC-2 type transporter 417 551 IPR013525 GO:0016020|GO:0140359
Bisa07g0619 621 SMART AAA_5 75 277 IPR003593 GO:0016887
Bisa07g0619 621 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0619 Bisa-ChrBisa07 15395558 15402091 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0619 65 227 Calmodulin-binding Proteins AT2G36910 28.824 1.27e-07 53.1