Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0611 ATGACTTCCCTTCTTCATCCACCTGTTGAACCAAAAGCTGGTTACTGTGAACCAAATAATATCAACAGAGCTGTACAACTACAAACCAAACTAGACTTTATTACCCCATTTGAGAATGAAGCCACCAAGCCAACAAAAAGCAGCAAAGATACTCAGAGAATGGATGAAGGAGTTTTCCTGACATGGGAGGACTTGTGGGTGAGTGTTCCAAACGGAAAGAATAGGAAACCAATTCTGCAGGGTCTGACTGGGTATGCCATGCCAGGACAGCTTTTGGCTATATTGGGTCCTTCAGGCTGTGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCTCACACAAAACAAACAGGAAATATTCTAATCAACGGCCACAAACAAGCACTAGCTTATGGAACATCAGCATATGTTGCTCAAGATGATGCTATGTTGTCAACTTTAACAGCTGGAGAAGCTTTATACTACTCATCTCAGCTCCAGTTGCCGGATTCCATGTCCATCGAAGAGAAGAAGGAGAGAGCAAACTTTATACTCAGAGAAATGGGTCTCCAAGATGCCTTTCACACAAGGATTGGAGGTTGGACTTCTAAAGGCCTCAGCGGGGGACAAAAGAGGAGACTTAGCATCTGCATAGAGACTCTGACACGTCCAAGACTTCTCTTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCTTATTATGTCATGAGCAGAATTGCCAGACTAAATCTAATGGATGGCATTCAAAGGACTATTGTTGTATCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCATAACCTCTGCCTTCTGTCTTCTGGTGAAACAGTGTATTTTGGCCCTGCTTCTGCTGCAAATGAGTTCTTTGCCTCAAATGGTTTTCCTTGCCCAACTCTCTACAATCCCTCTGATCATTTCTTAAGGATCATAAACAAGGATTTTGAACAGGATGCTGAAGAAGGTTTTGGTAAAGGAGTAACCACAGAAGAAGCAATTAATATCCTTGTAAAGTCTTATATATCCTCTGAAATTTGCAAACAAATTCAAACAGAAGTGGAAGAAATAAGTGAAAGTGATTCTGGAGCAACTGAGATGAAGAGAGTCCACGCTACATTCTTCACTCAGTGCCTCATTCTTATAAGAAGATCTTCCCTGCATATGTATCGTAACATGAGCAATTATTGGTTACGTCTAGCCGTATATGCTGCAATAGCTATTAGTCTTGGCACTATATTCTATGACGTTGATTCAAGTTCTGGATCTATCCAGGCTAGAGGATCACTGCTCACTTTTTTTATCTCAGTGCTGACTTTCATAACCCTTATTGGTGGATTCCCTCCATTTTTGGAGGAAATGAAGGTATTTAAACGAGAGAGATTGAATGGACATTATGGTGTTACTGCTTTTCTCGTTGGCAACACATTCTCTGCTGTTCCATACATGCTACTGATATCTTTGATACCTGGAGGAATAGTTCATTACCTTTCCGGGTTGCACAAAGGACTTGGACACTTTCTGTACCTAATAGCTGTGTTGTTCGCGACTGTTATGTCTGTGGAGAGCCTCATGATGGTTGTTGGGAGTATGTTCCCCAATTTCATAATGGGCATGATCATTGTTGGTGGAATCCAAGGAGTGATGATCTTGATTGGTGGATTCTATCGACTACCAAATGATCTTCCCAGGCCATTTTGGAGATACCCTTTGTACTATATCTCCTTCCACAAGTATGCCTTCCAGGGGTTGTTCAAGAATGAATTTGAAGGTTTAACATTCGCTACAGATCAAGATGGAGGCAACAAAACCATTAGTGGTAGGGACATTCTAACAAACATATGGCAGGTGGAAATGGGTCACTCCAAGTGGATTGATCTTGTTATCTTGCTTGGAATGATTTTTCTTTATCGACTTCTTTTCTTGGCCATTACTAAGAGCAGGGAGAAGCCAAAGCCTGTGGTTGCAGCTATCGGTTGTCCTCAAGTAAAACTTTTCAATGTAGTTTCCTGA 2028 0.4167 MTSLLHPPVEPKAGYCEPNNINRAVQLQTKLDFITPFENEATKPTKSSKDTQRMDEGVFLTWEDLWVSVPNGKNRKPILQGLTGYAMPGQLLAILGPSGCGKTTLLDALAGRLGSHTKQTGNILINGHKQALAYGTSAYVAQDDAMLSTLTAGEALYYSSQLQLPDSMSIEEKKERANFILREMGLQDAFHTRIGGWTSKGLSGGQKRRLSICIETLTRPRLLFLDEPTSGLDSAASYYVMSRIARLNLMDGIQRTIVVSIHQPSSEVFQLFHNLCLLSSGETVYFGPASAANEFFASNGFPCPTLYNPSDHFLRIINKDFEQDAEEGFGKGVTTEEAINILVKSYISSEICKQIQTEVEEISESDSGATEMKRVHATFFTQCLILIRRSSLHMYRNMSNYWLRLAVYAAIAISLGTIFYDVDSSSGSIQARGSLLTFFISVLTFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLVGNTFSAVPYMLLISLIPGGIVHYLSGLHKGLGHFLYLIAVLFATVMSVESLMMVVGSMFPNFIMGMIIVGGIQGVMILIGGFYRLPNDLPRPFWRYPLYYISFHKYAFQGLFKNEFEGLTFATDQDGGNKTISGRDILTNIWQVEMGHSKWIDLVILLGMIFLYRLLFLAITKSREKPKPVVAAIGCPQVKLFNVVS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0611 675 SMART AAA_5 88 277 IPR003593 GO:0016887
Bisa07g0611 675 Pfam ABC transporter 82 230 IPR003439 GO:0005524
Bisa07g0611 675 Pfam ABC-2 type transporter 262 320 IPR043926 GO:0140359
Bisa07g0611 675 Pfam ABC-2 type transporter 381 594 IPR013525 GO:0016020|GO:0140359
Bisa07g0611 675 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 60 305 IPR003439 GO:0005524
Bisa07g0611 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 294 IPR027417 -
Bisa07g0611 675 ProSitePatterns ABC transporters family signature. 202 216 IPR017871 GO:0005524|GO:0016887
Bisa07g0611 675 Gene3D - 59 297 IPR027417 -
Bisa07g0611 675 FunFam ABC transporter G family member 11 58 345 - -
Bisa07g0611 675 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 48 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0611 Bisa-ChrBisa07 15271970 15275283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0611 78 290 Calmodulin-binding Proteins AT2G36910 26.244 2.31e-07 52.4