Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0609 ATGAAGGGGGAATTGGAGAAGAAGGGAAGGGATAAAAACGGCAGGGAAGGTCAGAAGGGACTCGCCACTTCTCAGGTGCCGGCGTGTCTCTGTCACGGAGGAACCATGGAAAACGATGACGTTGATATGCCTACCGCAGAGGCTAGCGGAGTAGACTTGGATGACATGAAGAAGCGCTTGAAGGAAATGGAAGACGAAGCTGCTGCTTTGCGAGAGATGCAGGCCAAGGTGGAGAAGGAGATGGGCGCCGTGCAAGATCCTGCTACTGCTGCTGCAAGTCAGGCCAATAGAGAGGAAGTAGATTCTCGGTCAGTCTTTGTAGGCAATGTAGACTATTCGTGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACAGTAAACAGGGTCACCATTCGTACTGACAAGTTTGGCCAACCCAAGGGTTATGCTTATGTGGAGTTCCTTGAAGCTGAGGCTGTTCAGGAGGCCCTTCTGCTGAATGAATCTGAACTACATGGGCGCCAATTGAAGGTTACTGCAAAGAGGACTAACATACCTGGGATGAAGCAGTATCGTCCTCGCCGGCCCAATCCTTATATGGGGTTTCGAGGCAGAACCCCATTTGCACCTCCATTTGCCTATTCTCCATATGGATATGGAAAGGTTCCAAGGTTCAGAATGCCAATGCGTTACAGCCCCTACTATTGA 696 0.5014 MKGELEKKGRDKNGREGQKGLATSQVPACLCHGGTMENDDVDMPTAEASGVDLDDMKKRLKEMEDEAAALREMQAKVEKEMGAVQDPATAAASQANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEAEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNPYMGFRGRTPFAPPFAYSPYGYGKVPRFRMPMRYSPYY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0609 231 MobiDBLite consensus disorder prediction 1 26 - -
Bisa07g0609 231 CDD RRM_II_PABPs 104 175 - -
Bisa07g0609 231 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 105 173 IPR000504 GO:0003723
Bisa07g0609 231 MobiDBLite consensus disorder prediction 1 17 - -
Bisa07g0609 231 Coils Coil 46 80 - -
Bisa07g0609 231 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 103 179 IPR000504 GO:0003723
Bisa07g0609 231 Gene3D - 44 176 IPR012677 -
Bisa07g0609 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 30 189 - -
Bisa07g0609 231 SMART rrm1_1 104 175 IPR000504 GO:0003723
Bisa07g0609 231 SUPERFAMILY RNA-binding domain, RBD 94 201 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0609 Bisa-ChrBisa07 15211394 15216749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa07g0609 104 174 Eukaryotic Initiation Factors Gene Family AT2G36660 31.944 1.76e-07 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa07g0609 07 15211394 15216749 Bisa07g0609 07 15211394 15216749 CCT