Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa07g0575 ATGGCCACAGTCGCCACCACCGCAGCACCGTCAGCACCACCGCCACAAACCCTCAGATTGGAGTCCCTTGCTCGCGTAGACACCACCACTCTCTCCCAGTCTGAGCTTCAGGCCCTCTCTCTCTGCTCACTGTCCGCCTTTGATCTTCGTTCTACCACTCACCTTGTTTTTCCCAAAGTTGACCGGTCACTCTTCAACGAGAGCGCTGGCTCCCGGCGCCAGACCTACTCTCGACCTCGCAAACCCCAATCTCCTTCCGATTCCCCCACCGGTCACCGCCGCCGCGTCGCCGGGATTCTTCCAGCTCCGAAGCTCCCTCCGGTCCCCGACGACGACCCAGAGAACATAGAGAACCGCAAGATTATAGATTATCTAAAGCAACTGATCAGGGAGGACCCAAAATTCGATCAAGTTGAGCTAGCCCCACCTTCTGTTTCCGCAGAAATTTTATCGAATCTCGAACCGAGGGGCGGAATTGTTGACAGAGAAGATGGGACATTGGTGAAATTAGGCGGGGAACGGAAGAGGAAGAGGGGGAGGAAGCCGAAAGTGAAGGTGCATTTGAAGGAGTGCTATAGAGGAATGGAGATTGTGAATAAGAATGGTGTTGCGATTGATCTTTCTGGTTTAGCGAATGTGGAGGATCCCTTTGCTGAGGAGTTGAAAAGAAGGACTGTGGGGTTGCAGAGTGAAGAAGAGCTGTTGGGGTTTTTGAGGGATTTGGAGGGACAATGGGGTAGTAGGAGGAAGAAGAGGAAGATTGTGGACGCCGGAAATTTCGGGGATGTATTGCCGGTTGGCTGGAAGCTTCTACTGGGTTTGAAGAGAAAGGACGGTCGCGCGTGGATCTATTGCCGCAGATACATAAGTCCTAGTGGACAACAATTTGTATCTTGCAAAGAAGTTTCATCATATCTCCAGTCAATTTTTGGTCACAATGATGCACAATTACCAATGAATCATAGGGGTGAAAATATGCAGGTGGACAATAGAGTGTCTACTGAAAATCCTGCAGGTGTTGCCCATGAGGATCAAGTTCAGAGGAAGATCATTGTGACTGACTCAGATTTACCAAGTTCTTCAGTATGTAATGACCGATTGAAGGAAGTAGCCTTAATGGGAATTGAGAATCTTGCTGAAGTGCAAATACATGACCTATTTGAATGTCACAAGTGCAGCATGACCTTTGATGAGAAGGATTCATACTTGCAGCACTTGTTGTCTTATCACCAGAGGACAACCAGGAGATATCGACTTGGTTCTTCTGTTGGAGATGGTGTTATAATTAAAGATGGAAAATTTGAGTGCCAGTTCTGCCATAAGGTGTTCTTGGAAAGGCGTCGCTACAATGGTCATGTGGGGATCCATGTCAGGAACTATGTGAGAAAAGTTGAAGAATCGCCAAGTCAGATGAATGTTCAAAGGAGAGATAAGTCTCCAATCAAGGAGGAACTGCCTTCAAGGATTTCTAAGATGGATGCTCTCATAGAAATTGCTCAGAACTCTATTATGGAGAATTCTGCAATGGAATCCCATAGTAATGATGCCTCCTCTCCTGGTCAACCAAATTTGAATTCTGCTTTAGAAACTGCTGCTGGCAGCTTAGATCATGACACAAATTTTGAGTCTCCTCTTAGTGAACAGCAAATGGAAGAGAGAATCACTGGCAATAATGTGGATCAAGATTTAAATCAGCAAGATAGTCATCATGTAGTCATGGATGAAAAAGTAGAGAAAACTGATGATGGTGACAAAGTTGCAGATTCTAAGATAAATACCTGTCTGGATCACATGGGCTTGTTGACTGTAAACAGACAAAATTTTAATGCATCTGAGAACTCAAAGGGAAAAGATGATGTGGCATTGACAATTGACGGTATTAATCGGTCTGGGGTTGATTTAAAAGAAATTTCTCAAAGCCCTTTACTTCCTTTATCTGGCAATTGCATAATCCCTGATGCTGAGAATAATGGATGTTCTGGTGGCACTAATAATATGGAGCAACTTAAGCTTGATGAAAACAAAAAAATCAAGAGTCAGTGCATAATTGGGCTAGATGGTACAAACAATATATCTGTTAGCTCTAATACCCAGAAGTCAGTTATGCCTACTTCTGAAGAGAATGTAGTCCAGTCTGGGGTTTCTGCCCCCTCTATTTCCACAGTGCAATCTTTGGATTGTTTTCCCGATTTTACTGCACTCTCAGATAAGGGTGGAATACAATTTTGCAGTGCTGACCACAAATATGATAATGCGAATGGGTTCCAGGAACCTAGGTTGGATGATATACAAACTCTCAAGTTTGCAAATAGTCGAGATTCTCCTTCTCTGCCTCATGTGCCAACAGATTTGCCAAACAATGCACAGATGGAAGGGGCATATGCTTCCTCAGTTCAGTTTGAATCACAAGTAGGCAGAAACCAGATTACGACTGTGTGTGTATGGTGTGGAATAGAGTTTAATTATGATGCTGTTGATTCTGAAATACAACTGGATTCCGTTGGATTCATGTGCCTAGCTTGTAAGGCCAAAATATCTGGTCAAATGAATGTTTTGAACAGTGGATCACCCTTGAATGCTGAGCATATTTGA 2592 0.4429 MATVATTAAPSAPPPQTLRLESLARVDTTTLSQSELQALSLCSLSAFDLRSTTHLVFPKVDRSLFNESAGSRRQTYSRPRKPQSPSDSPTGHRRRVAGILPAPKLPPVPDDDPENIENRKIIDYLKQLIREDPKFDQVELAPPSVSAEILSNLEPRGGIVDREDGTLVKLGGERKRKRGRKPKVKVHLKECYRGMEIVNKNGVAIDLSGLANVEDPFAEELKRRTVGLQSEEELLGFLRDLEGQWGSRRKKRKIVDAGNFGDVLPVGWKLLLGLKRKDGRAWIYCRRYISPSGQQFVSCKEVSSYLQSIFGHNDAQLPMNHRGENMQVDNRVSTENPAGVAHEDQVQRKIIVTDSDLPSSSVCNDRLKEVALMGIENLAEVQIHDLFECHKCSMTFDEKDSYLQHLLSYHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPSQMNVQRRDKSPIKEELPSRISKMDALIEIAQNSIMENSAMESHSNDASSPGQPNLNSALETAAGSLDHDTNFESPLSEQQMEERITGNNVDQDLNQQDSHHVVMDEKVEKTDDGDKVADSKINTCLDHMGLLTVNRQNFNASENSKGKDDVALTIDGINRSGVDLKEISQSPLLPLSGNCIIPDAENNGCSGGTNNMEQLKLDENKKIKSQCIIGLDGTNNISVSSNTQKSVMPTSEENVVQSGVSAPSISTVQSLDCFPDFTALSDKGGIQFCSADHKYDNANGFQEPRLDDIQTLKFANSRDSPSLPHVPTDLPNNAQMEGAYASSVQFESQVGRNQITTVCVWCGIEFNYDAVDSEIQLDSVGFMCLACKAKISGQMNVLNSGSPLNAEHI 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa07g0575 863 SUPERFAMILY DNA-binding domain 262 309 IPR016177 GO:0003677
Bisa07g0575 863 ProSiteProfiles Zinc finger C2H2 type domain profile. 434 461 IPR013087 -
Bisa07g0575 863 MobiDBLite consensus disorder prediction 508 527 - -
Bisa07g0575 863 Gene3D Classic Zinc Finger 374 462 - -
Bisa07g0575 863 ProSiteProfiles Zinc finger C2H2 type domain profile. 387 415 IPR013087 -
Bisa07g0575 863 SMART c2h2final6 387 410 IPR013087 -
Bisa07g0575 863 SMART c2h2final6 434 456 IPR013087 -
Bisa07g0575 863 MobiDBLite consensus disorder prediction 68 90 - -
Bisa07g0575 863 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 1 637 IPR037472 -
Bisa07g0575 863 MobiDBLite consensus disorder prediction 68 115 - -
Bisa07g0575 863 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 254 326 IPR001739 GO:0003677
Bisa07g0575 863 ProSitePatterns Zinc finger C2H2 type domain signature. 389 410 IPR013087 -
Bisa07g0575 863 ProSitePatterns Zinc finger C2H2 type domain signature. 436 456 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa07g0575 Bisa-ChrBisa07 14347135 14351375 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa07g0575 None None None